ID A0A063B0N3_9BURK Unreviewed; 675 AA.
AC A0A063B0N3;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE SubName: Full=GAF modulated sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:KDB05955.1};
GN ORFNames=LIG30_4575 {ECO:0000313|EMBL:KDB05955.1};
OS Burkholderia sp. lig30.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Burkholderiaceae; Burkholderia.
OX NCBI_TaxID=1192124 {ECO:0000313|EMBL:KDB05955.1, ECO:0000313|Proteomes:UP000027020};
RN [1] {ECO:0000313|EMBL:KDB05955.1, ECO:0000313|Proteomes:UP000027020}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LIG30 {ECO:0000313|Proteomes:UP000027020};
RA Woo H.L., Utturkar S.M., Klingeman D.M., Simmons B.A., DeAngelis K.M.,
RA Brown S.D., Hazen T.C.;
RT "Draft Genome of the Lignin-degrading Burkholderia sp. Strain LIG30,
RT Isolated from Wet Tropical Forest Soil.";
RL Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KDB05955.1}.
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DR EMBL; JGVW01000132; KDB05955.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A063B0N3; -.
DR STRING; 1192124.LIG30_4575; -.
DR PATRIC; fig|1192124.4.peg.4919; -.
DR eggNOG; COG3284; Bacteria.
DR Proteomes; UP000027020; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR PANTHER; PTHR32071:SF95; TRANSCRIPTIONAL REGULATORY PROTEIN ZRAR; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000027020};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 349..579
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 675 AA; 73236 MW; EDF0275A652F84CB CRC64;
MQQTGTPLDW FPRPQHEASI MAAWEHLVTG SEWHSADVRG VVDDSWQRCL VGHVDPGVGR
APPPLDESRL MQWRSANAQL IDVSLPLMQQ TREFLSQTGT VMLLADPDGM ILQQEGDMRI
IEPASEVGLV PGCDWTELNC GTNAIGTALA LRQPVQIHGA EHFCAGIKRW TCSATVIHDP
LDGHVLGVID VSGLADTYSR YSLALAVSLA GRIEGRLAKD AMERRLRLLD RCTARFGASP
TDAILIVDER GRLVKANAQV VPALRRLGFD IHLDAGFVLP GMDADTRATR PANDAPPWLR
YAHVEALREG TDVLGFMVVI PGAAAPRGAI TAARGRDRTR SAPYAFERIV GDSPALRAAV
DKARQLAPSK VPVLLLGETG VGKELFAQGI HQASERADGP FVALNCGGLS RDLLVSELFG
YAEGAFTGAR KSGAAGKIEA ADGGTLFLDE IGEMPLDIQP HLLRVLEENE IYRLGENTPR
KVNFRLVAAT HRDLKDAIAK GMFRMDLFYR IAVTTVSIPS LRERADDLPA LVDHWLSHLC
ECYGLPPRSF DDDAYARLLN YGWPGNVREL RNAIEGSLLL SDGPVIKADK LPTEIGAAAR
PAMPAAPLAA DLPAQAAGES LKTAEADYIR RALARHAGNL TQTASHLGIA KSTLYEKIRK
YKLVDAVSDV RRRGV
//
