ID A0A063B607_9BURK Unreviewed; 665 AA.
AC A0A063B607;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 45.
DE SubName: Full=Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:KDB06051.1};
GN ORFNames=LIG30_4503 {ECO:0000313|EMBL:KDB06051.1};
OS Burkholderia sp. lig30.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Burkholderiaceae; Burkholderia.
OX NCBI_TaxID=1192124 {ECO:0000313|EMBL:KDB06051.1, ECO:0000313|Proteomes:UP000027020};
RN [1] {ECO:0000313|EMBL:KDB06051.1, ECO:0000313|Proteomes:UP000027020}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LIG30 {ECO:0000313|Proteomes:UP000027020};
RA Woo H.L., Utturkar S.M., Klingeman D.M., Simmons B.A., DeAngelis K.M.,
RA Brown S.D., Hazen T.C.;
RT "Draft Genome of the Lignin-degrading Burkholderia sp. Strain LIG30,
RT Isolated from Wet Tropical Forest Soil.";
RL Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KDB06051.1}.
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DR EMBL; JGVW01000127; KDB06051.1; -; Genomic_DNA.
DR RefSeq; WP_038715861.1; NZ_JGVW01000127.1.
DR AlphaFoldDB; A0A063B607; -.
DR STRING; 1192124.LIG30_4503; -.
DR PATRIC; fig|1192124.4.peg.4800; -.
DR eggNOG; COG3284; Bacteria.
DR OrthoDB; 9761705at2; -.
DR Proteomes; UP000027020; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR PANTHER; PTHR32071:SF77; TRANSCRIPTIONAL REGULATORY PROTEIN GLRR; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000027020};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 338..568
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
FT REGION 1..23
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 302..334
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 304..319
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 665 AA; 72243 MW; 442C48481A80A8EC CRC64;
MRDDVHQPAG SVAVRTPGWP APSIQKAHER SETFGLCASA RPDYDILSNT ALVLKREQHR
VLCAHATPVM ETLHDQIVNT QSMIVLTDAE GLILHSIGDD DFLQRAEKVA LRPGANWAES
HQGTNAIGTA LAERCAMVVH GDQHYLAANR FLTCSSVPIL DPYGDVIGVL DVTGDHRSYH
QHTMALAKMS VQMIENHLFT TTFQETLQVS FHGRPEFLGT LMEGIAAFTC DGRFLSANRS
AQFQLGMPLA ALRAHTLSSL FQITSAQLID RMRASTDRHL TLNLCNGAVV CARVQFKRAA
QAEGSRPTDV HDARRASVKT DVPHPGAPSA GLSRLSYLDT GDPQVASVIA KVRKVIGKDI
PILITGETGT GKELLAQAIH NDSPRRDGPF VAVNCASIPE TLIESELFGY EEGAFTGARR
KGALGKLLQA NGGTLFLDEI GDMPYPLQVR LLRVLQERVV NPLGSAKTIP VDISIICATH
RDLRDMIAQN RFREDLYYRL NGLVVRLPPL RDRTDLAVVI QKMLQSESLT GANQQPLDVA
PEVMAMFERC VWPGNFRQLG NLLRTAAAMV DADGEIRREH LPDDFFDDLR RAVVQDVPEL
PVAVEGGGSP TDARLQDVAA SAIAAALARH GGNVSAAARA LGVSRNTIYR KMPAGHEPGG
TSNDA
//
