GenomeNet

Database: UniProt
Entry: A0A066X678_COLSU
LinkDB: A0A066X678_COLSU
Original site: A0A066X678_COLSU 
ID   A0A066X678_COLSU        Unreviewed;       171 AA.
AC   A0A066X678;
DT   03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT   03-SEP-2014, sequence version 1.
DT   24-JAN-2024, entry version 38.
DE   RecName: Full=DNA-directed RNA polymerase subunit {ECO:0000256|RuleBase:RU369086};
GN   ORFNames=CSUB01_06077 {ECO:0000313|EMBL:KDN61226.1};
OS   Colletotrichum sublineola (Sorghum anthracnose fungus).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC   Hypocreomycetidae; Glomerellales; Glomerellaceae; Colletotrichum;
OC   Colletotrichum graminicola species complex.
OX   NCBI_TaxID=1173701 {ECO:0000313|EMBL:KDN61226.1, ECO:0000313|Proteomes:UP000027238};
RN   [1] {ECO:0000313|Proteomes:UP000027238}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=TX430BB {ECO:0000313|Proteomes:UP000027238};
RX   PubMed=24926053; DOI=10.1128/genomeA.00540-14;
RA   Baroncelli R., Sanz-Martin J.M., Rech G.E., Sukno S.A., Thon M.R.;
RT   "Draft genome sequence of Colletotrichum sublineola, a destructive pathogen
RT   of cultivated sorghum.";
RL   Genome Announc. 2:E0054014-E0054014(2014).
CC   -!- FUNCTION: DNA-dependent RNA polymerase which catalyzes the
CC       transcription of DNA into RNA using the four ribonucleoside
CC       triphosphates as substrates. {ECO:0000256|RuleBase:RU369086}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC       ECO:0000256|RuleBase:RU369086}.
CC   -!- SIMILARITY: Belongs to the eukaryotic RPB7/RPC8 RNA polymerase subunit
CC       family. {ECO:0000256|ARBA:ARBA00009307}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KDN61226.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; JMSE01001434; KDN61226.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A066X678; -.
DR   STRING; 1173701.A0A066X678; -.
DR   eggNOG; KOG3298; Eukaryota.
DR   HOGENOM; CLU_085878_2_0_1; -.
DR   OMA; MRQPGLG; -.
DR   OrthoDB; 646189at2759; -.
DR   Proteomes; UP000027238; Unassembled WGS sequence.
DR   GO; GO:0055029; C:nuclear DNA-directed RNA polymerase complex; IEA:UniProt.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006352; P:DNA-templated transcription initiation; IEA:UniProtKB-UniRule.
DR   CDD; cd04329; RNAP_II_Rpb7_N; 1.
DR   CDD; cd04462; S1_RNAPII_Rpb7; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   Gene3D; 3.30.1490.120; RNA polymerase Rpb7-like, N-terminal domain; 1.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR036898; RNA_pol_Rpb7-like_N_sf.
DR   InterPro; IPR045113; Rpb7-like.
DR   InterPro; IPR005576; Rpb7-like_N.
DR   InterPro; IPR003029; S1_domain.
DR   PANTHER; PTHR12709:SF4; DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7; 1.
DR   PANTHER; PTHR12709; DNA-DIRECTED RNA POLYMERASE II, III; 1.
DR   Pfam; PF00575; S1; 1.
DR   Pfam; PF03876; SHS2_Rpb7-N; 1.
DR   SUPFAM; SSF88798; N-terminal, heterodimerisation domain of RBP7 (RpoE); 1.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
PE   3: Inferred from homology;
KW   DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW   ECO:0000256|RuleBase:RU369086}; Nucleus {ECO:0000256|RuleBase:RU369086};
KW   Reference proteome {ECO:0000313|Proteomes:UP000027238};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163,
KW   ECO:0000256|RuleBase:RU369086}.
FT   DOMAIN          8..63
FT                   /note="RNA polymerase Rpb7-like N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF03876"
FT   DOMAIN          78..153
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|Pfam:PF00575"
SQ   SEQUENCE   171 AA;  19237 MW;  687FAF723030F9F6 CRC64;
     MFFLYNMERR VTLHPSYFGR NMHELVTSKL LKDVEGTCAG SYYIISIMDT FDISEGRILP
     GSGLAEFTVG YRAVVWRPFK GETVDAVVYS VNHQGFFAQA GPLRLFVSAH LIPSEIKWDP
     NATPPQFTNN EDTIIEPGTH VRVKVIGTRT EVGEMWAIGS IKEDYLGCLQ D
//
DBGET integrated database retrieval system