ID A0A067E2T9_CITSI Unreviewed; 1029 AA.
AC A0A067E2T9;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 24-JAN-2024, entry version 32.
DE RecName: Full=Pre-mRNA-processing protein 40A {ECO:0008006|Google:ProtNLM};
GN ORFNames=CISIN_1g001687mg {ECO:0000313|EMBL:KDO49544.1};
OS Citrus sinensis (Sweet orange) (Citrus aurantium var. sinensis).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus.
OX NCBI_TaxID=2711 {ECO:0000313|EMBL:KDO49544.1, ECO:0000313|Proteomes:UP000027120};
RN [1] {ECO:0000313|EMBL:KDO49544.1, ECO:0000313|Proteomes:UP000027120}
RP NUCLEOTIDE SEQUENCE.
RG International Citrus Genome Consortium;
RA Gmitter F., Chen C., Farmerie W., Harkins T., Desany B., Mohiuddin M.,
RA Kodira C., Borodovsky M., Lomsadze A., Burns P., Jenkins J., Prochnik S.,
RA Shu S., Chapman J., Pitluck S., Schmutz J., Rokhsar D.;
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; KK785108; KDO49544.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A067E2T9; -.
DR STRING; 2711.A0A067E2T9; -.
DR PaxDb; 2711-XP_006486884-1; -.
DR eggNOG; KOG0152; Eukaryota.
DR Proteomes; UP000027120; Unassembled WGS sequence.
DR GO; GO:0005685; C:U1 snRNP; IBA:GO_Central.
DR GO; GO:0071004; C:U2-type prespliceosome; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0045292; P:mRNA cis splicing, via spliceosome; IEA:InterPro.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IBA:GO_Central.
DR CDD; cd00201; WW; 2.
DR Gene3D; 2.20.70.10; -; 2.
DR Gene3D; 1.10.10.440; FF domain; 5.
DR InterPro; IPR002713; FF_domain.
DR InterPro; IPR036517; FF_domain_sf.
DR InterPro; IPR039726; Prp40-like.
DR InterPro; IPR001202; WW_dom.
DR InterPro; IPR036020; WW_dom_sf.
DR PANTHER; PTHR11864:SF33; PRE-MRNA-PROCESSING PROTEIN 40B; 1.
DR PANTHER; PTHR11864; PRE-MRNA-PROCESSING PROTEIN PRP40; 1.
DR Pfam; PF01846; FF; 3.
DR Pfam; PF00397; WW; 2.
DR SMART; SM00441; FF; 5.
DR SMART; SM00456; WW; 2.
DR SUPFAM; SSF81698; FF domain; 5.
DR SUPFAM; SSF51045; WW domain; 2.
DR PROSITE; PS51676; FF; 5.
DR PROSITE; PS01159; WW_DOMAIN_1; 1.
DR PROSITE; PS50020; WW_DOMAIN_2; 2.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000027120}.
FT DOMAIN 227..260
FT /note="WW"
FT /evidence="ECO:0000259|PROSITE:PS50020"
FT DOMAIN 268..301
FT /note="WW"
FT /evidence="ECO:0000259|PROSITE:PS50020"
FT DOMAIN 478..532
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 544..600
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 613..667
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 685..748
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 820..875
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT REGION 1..48
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 78..129
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 309..331
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 433..458
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 882..1029
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 584..621
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 658..689
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 21..48
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 78..110
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 111..129
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 312..331
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 444..458
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 882..947
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 958..974
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 984..1001
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1008..1029
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1029 AA; 116121 MW; 31BD5F925F07EF53 CRC64;
MAEMANNAPY SGAQVPHQPP MVGSMDPPRG FGPPIPSQYR PLVPAPQPQH YVPMASQHFQ
PGGQGGLIMN AGFPSQPLQP PFRPLMHPLP ARPGPPAPSH VPPPPQVMSL PNAQPSNHIP
PSSLPRPNVQ ALSSYPPGLG GLGRPVAASY TFAPSSYGQP QLIGNVNIGS QQPMSQMHVP
SISAGGQLGV SVSQSTVSST PVQPTDEQMA ATTASAPLPT LQPKSAEGVQ TDWKEHTSAD
GRRYYFNKRT RVSTWDKPFE LMTTIERADA STDWKEFTSP DGRKYYYNKV TKQSKWSLPD
ELKLAREQAE KASIKGTQSE TSPNSQTSIS FPSSVVKAPS SADISSSTVE VIVSSPVAVV
PIIAASETQP ALVSVPSTSP VITSSVVANA DGFPKTVDAI APMIDVSSSI GEAVTDNTVA
EAKNNLSNMS ASDLVGASDK VPPPVTEETR KDAVRGEKVS DALEEKTVEQ EHFAYANKLE
AKNAFKALLE SANVGSDWTW DQALRAIIND RRYGALRTLG ERKTAFNEYL GQKKKQDAEE
RRLKLKKARD DYKKMLEESV ELTSSTRWSK AVTMFENDER FKALERERDR KDMFDDHLDE
LKQKERAKAQ EERKRNIIEY RKFLESCDFI KANTQWRKVQ DRLEADERCS RLDKMDRLEI
FQEYLNDLEK EEEEQRKIQK EELSKTERKN RDEFRKLMEA DVALGTLTAK TNWRDYCIKV
KDSPPYMAVA SNTSGSTPKD LFEDVVEELQ KQFQEDKTRI KDAVKLRKIT LSSTWTFEDF
KASVLEDATS PPISDVNLKL IFDDLLIKVK EKEEKEAKKR KRLEDEFFDL LCSVKEISAT
STWENCRQLL EGSQEFSSIG DESICRGVFD EFVTQLKEQA KDYERKRKEE KAKREKEREE
RDRRKLKQGR DKERAREREK EDHSKKDGAD SDHDDSAEND SKRSGKDNDK KHRKRHQSAH
DSLDENEKDR SKNPHRHNSD RKKPRRLAST PESENESRHK RHRRDNRNGS RKNGDHEDLE
DGEYGGESR
//
