ID   A0A067FKC9_CITSI        Unreviewed;      1213 AA.
AC   A0A067FKC9;
DT   03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT   03-SEP-2014, sequence version 1.
DT   24-JAN-2024, entry version 36.
DE   RecName: Full=DNA damage-binding protein 1 {ECO:0008006|Google:ProtNLM};
GN   ORFNames=CISIN_1g000944mg {ECO:0000313|EMBL:KDO67798.1};
OS   Citrus sinensis (Sweet orange) (Citrus aurantium var. sinensis).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus.
OX   NCBI_TaxID=2711 {ECO:0000313|EMBL:KDO67798.1, ECO:0000313|Proteomes:UP000027120};
RN   [1] {ECO:0000313|EMBL:KDO67798.1, ECO:0000313|Proteomes:UP000027120}
RP   NUCLEOTIDE SEQUENCE.
RG   International Citrus Genome Consortium;
RA   Gmitter F., Chen C., Farmerie W., Harkins T., Desany B., Mohiuddin M.,
RA   Kodira C., Borodovsky M., Lomsadze A., Burns P., Jenkins J., Prochnik S.,
RA   Shu S., Chapman J., Pitluck S., Schmutz J., Rokhsar D.;
RL   Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   -!- SIMILARITY: Belongs to the RSE1 family.
CC       {ECO:0000256|ARBA:ARBA00038266}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; KK784896; KDO67798.1; -; Genomic_DNA.
DR   RefSeq; XP_006486011.1; XM_006485948.2.
DR   AlphaFoldDB; A0A067FKC9; -.
DR   STRING; 2711.A0A067FKC9; -.
DR   PaxDb; 2711-XP_006486011-1; -.
DR   GeneID; 102619030; -.
DR   KEGG; cit:102619030; -.
DR   eggNOG; KOG1898; Eukaryota.
DR   OrthoDB; 101343at2759; -.
DR   Proteomes; UP000027120; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0005686; C:U2 snRNP; IBA:GO_Central.
DR   GO; GO:0030620; F:U2 snRNA binding; IBA:GO_Central.
DR   GO; GO:0000398; P:mRNA splicing, via spliceosome; IBA:GO_Central.
DR   Gene3D; 1.10.150.910; -; 1.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 3.
DR   InterPro; IPR004871; Cleavage/polyA-sp_fac_asu_C.
DR   InterPro; IPR018846; Cleavage/polyA-sp_fac_asu_N.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   InterPro; IPR036322; WD40_repeat_dom_sf.
DR   PANTHER; PTHR10644; DNA REPAIR/RNA PROCESSING CPSF FAMILY; 1.
DR   PANTHER; PTHR10644:SF1; SPLICING FACTOR 3B SUBUNIT 3; 1.
DR   Pfam; PF03178; CPSF_A; 1.
DR   Pfam; PF10433; MMS1_N; 1.
DR   SUPFAM; SSF69322; Tricorn protease domain 2; 1.
DR   SUPFAM; SSF50978; WD40 repeat-like; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000027120}.
FT   DOMAIN          75..589
FT                   /note="Cleavage/polyadenylation specificity factor A
FT                   subunit N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF10433"
FT   DOMAIN          860..1179
FT                   /note="Cleavage/polyadenylation specificity factor A
FT                   subunit C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF03178"
SQ   SEQUENCE   1213 AA;  134442 MW;  2F41CDD8C8329915 CRC64;
     MYLYSLTLQQ PTGIIAAING NFSGTKTPEI VVARGKVLEL LRPENSGRIE TLVSTEIFGA
     IRSLAQFRLT GSQKDYIVVG SDSGRIVILE YNPSKNVFDK IHQETFGKSG CRRIVPGQYL
     AVDPKGRAVM IGACEKQKLV YVLNRDTAAR LTISSPLEAH KSHTIVYSIC GIDCGFDNPI
     FAAIELDYSE ADQDSTGQAA SEAQKNLTFY ELDLGLNHVS RKWSEPVDNG ANMLVTVPGG
     GDGPSGVLVC AENFVIYKNQ GHPDVRAVIP RRADLPAERG VLIVSAATHR QKTLFFFLLQ
     TEYGDIFKVT LEHDNEHVSE LKIKYFDTIP VTASMCVLKS GYLFAASEFG NHALYQFQAI
     GADPDVEASS STLMETEEGF QPVFFQPRGL KNLVRIEQVE SLMPIMDMRI ANLFEEEAPQ
     IFTLCGRGPR SSLRILRPGL AVSEMAVSQL PGVPSAVWTV KKNVNDEFDA YIVVSFNNAT
     LVLSIGETVE EVSDSGFLDT TPSLAVSLIG DDSLMQVHPS GIRHIREDGR INEWRTPGKR
     TIVKVGSNRL QVVIALSGGE LIYFEVDMTG QLLEVEKHEM SGDVACLDIA SVPEGRKRSR
     FLAVGSYDNT IRILSLDPDD CMQILSVQSV SSPPESLLFL EVQASVGGED GADHPASLFL
     NAGLQNGVLF RTVVDMVTGQ LSDSRSRFLG LRPPKLFSVV VGGRAAMLCL SSRPWLGYIH
     RGRFLLTPLS YETLEYAASF SSDQCVEGVV SVAGNALRVF TIERLGETFN ETALPLRYTP
     RRFVLQPKKK LMVIIETDQG ALTAEEREAA KKECFEAAGM GENGNGNMDQ MENGDDENKY
     DPLSDEQYGY PKAESDKWVS CIRVLDPRSA NTTCLLELQD NEAAFSICTV NFHDKEHGTL
     LAVGTAKGLQ FWPKRNIVAG YIHIYRFVEE GKSLELLHKT QVEGIPLALC QFQGRLLAGI
     GPVLRLYDLG KKRLLRKCEN KLFPNTIVSI NTYRDRIYVG DIQESFHFCK YRRDENQLYI
     FADDSVPRWL TAAHHIDFDT MAGADKFGNI YFVRLPQDVS DEIEEDPTGG KIKWEQGKLN
     GAPNKMEEIV QFHVGDVVTS LQKASLVPGG GESVIYGTVM GSLGAMLAFS SRDDVDFFSH
     LEMHMRQEHP PLCGRDHMAY RSAYFPVKDV IDGDLCEQFP TLSLDLQRKI ADELDRTPGE
     ILKKLEEIRN KIV
//