ID A0A067JEM3_JATCU Unreviewed; 428 AA.
AC A0A067JEM3;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 42.
DE RecName: Full=C3H1-type domain-containing protein {ECO:0000259|PROSITE:PS50103};
GN ORFNames=JCGZ_26167 {ECO:0000313|EMBL:KDP22336.1};
OS Jatropha curcas (Barbados nut).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae;
OC Jatropha.
OX NCBI_TaxID=180498 {ECO:0000313|EMBL:KDP22336.1, ECO:0000313|Proteomes:UP000027138};
RN [1] {ECO:0000313|EMBL:KDP22336.1, ECO:0000313|Proteomes:UP000027138}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. GZQX0401 {ECO:0000313|Proteomes:UP000027138};
RC TISSUE=Young leaves {ECO:0000313|EMBL:KDP22336.1};
RX PubMed=24837971; DOI=10.1371/journal.pone.0097878;
RA Zhang L., Zhang C., Wu P., Chen Y., Li M., Jiang H., Wu G.;
RT "Global Analysis of Gene Expression Profiles in Physic Nut (Jatropha curcas
RT L.) Seedlings Exposed to Salt Stress.";
RL PLoS ONE 9:E97878-E97878(2014).
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DR EMBL; KK915447; KDP22336.1; -; Genomic_DNA.
DR RefSeq; XP_012090334.1; XM_012234944.1.
DR AlphaFoldDB; A0A067JEM3; -.
DR STRING; 180498.A0A067JEM3; -.
DR GeneID; 105648524; -.
DR KEGG; jcu:105648524; -.
DR OrthoDB; 363481at2759; -.
DR Proteomes; UP000027138; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 2.30.30.1190; -; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR InterPro; IPR041367; Znf-CCCH_4.
DR InterPro; IPR000571; Znf_CCCH.
DR InterPro; IPR036855; Znf_CCCH_sf.
DR PANTHER; PTHR44489; -; 1.
DR PANTHER; PTHR44489:SF1; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 63; 1.
DR Pfam; PF00400; WD40; 3.
DR Pfam; PF18044; zf-CCCH_4; 1.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 6.
DR SMART; SM00356; ZnF_C3H1; 2.
DR SUPFAM; SSF90229; CCCH zinc finger; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 2.
DR PROSITE; PS50294; WD_REPEATS_REGION; 2.
DR PROSITE; PS50103; ZF_C3H1; 2.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000027138};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 24..50
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 101..128
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT REPEAT 139..180
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 262..301
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT ZN_FING 24..50
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 101..128
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 54..90
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 75..90
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 428 AA; 46462 MW; 257EAF4FD273A599 CRC64;
MDLDAQGGNS RVFQRLGGQS VNDPRHQIVC LHWRAGRCNR FPCPYLHREL PAPPPAGSNG
NASKRGFAGD SGFSGRSGTR RSGNFSNSST WGRVGNNKTL RKAEKVCNYW VQGKCSYGDK
CRFLHSWSLG ESFALLTSLE GHQKVVTGIA LPSGSDKLYT GSNDETVRVW DCQSGQCMGV
VQLGGEVGCM ISEGPWIFVG VPNVVKAWNT QTNTDLSLTG PVGQVYALVV GNDLLFAGTQ
DGAILAWKFN AATFNFEPAA SLTGHSVAVV SLVVGANRLY SGSMDHSIRV WNLETLQCVQ
TLTDHTSVVM SVLCWDQFLL SCSLDQTIKV WAATESGNLE VTYTHKEEHG LLTLCGMHDF
EGKPILLCSC NDNSVHLFDL PSFSERGKIF SKQEIRAIQT GPGGLFFTGD GTGQVRVWKC
QVEPTPVA
//
