ID A0A067KEW2_JATCU Unreviewed; 2429 AA.
AC A0A067KEW2;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 49.
DE RecName: Full=PHD-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=JCGZ_07124 {ECO:0000313|EMBL:KDP33553.1};
OS Jatropha curcas (Barbados nut).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae;
OC Jatropha.
OX NCBI_TaxID=180498 {ECO:0000313|EMBL:KDP33553.1, ECO:0000313|Proteomes:UP000027138};
RN [1] {ECO:0000313|EMBL:KDP33553.1, ECO:0000313|Proteomes:UP000027138}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. GZQX0401 {ECO:0000313|Proteomes:UP000027138};
RC TISSUE=Young leaves {ECO:0000313|EMBL:KDP33553.1};
RX PubMed=24837971; DOI=10.1371/journal.pone.0097878;
RA Zhang L., Zhang C., Wu P., Chen Y., Li M., Jiang H., Wu G.;
RT "Global Analysis of Gene Expression Profiles in Physic Nut (Jatropha curcas
RT L.) Seedlings Exposed to Salt Stress.";
RL PLoS ONE 9:E97878-E97878(2014).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; KK914539; KDP33553.1; -; Genomic_DNA.
DR STRING; 180498.A0A067KEW2; -.
DR Proteomes; UP000027138; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0008168; F:methyltransferase activity; IEA:UniProtKB-KW.
DR GO; GO:0006325; P:chromatin organization; IEA:UniProtKB-KW.
DR GO; GO:0032259; P:methylation; IEA:UniProtKB-KW.
DR GO; GO:0060255; P:regulation of macromolecule metabolic process; IEA:UniProt.
DR GO; GO:0051171; P:regulation of nitrogen compound metabolic process; IEA:UniProt.
DR CDD; cd15571; ePHD; 1.
DR CDD; cd10518; SET_SETD1-like; 1.
DR Gene3D; 2.170.270.10; SET domain; 2.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 2.
DR InterPro; IPR034732; EPHD.
DR InterPro; IPR003616; Post-SET_dom.
DR InterPro; IPR001214; SET_dom.
DR InterPro; IPR046341; SET_dom_sf.
DR InterPro; IPR032308; TDBD.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR45838:SF4; HISTONE-LYSINE N-METHYLTRANSFERASE TRITHORAX; 1.
DR PANTHER; PTHR45838; HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER; 1.
DR Pfam; PF13831; PHD_2; 1.
DR Pfam; PF00856; SET; 2.
DR Pfam; PF16135; TDBD; 1.
DR Pfam; PF13832; zf-HC5HC2H_2; 1.
DR SMART; SM00249; PHD; 2.
DR SMART; SM00508; PostSET; 1.
DR SMART; SM00317; SET; 2.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR SUPFAM; SSF82199; SET domain; 2.
DR PROSITE; PS51805; EPHD; 1.
DR PROSITE; PS50868; POST_SET; 1.
DR PROSITE; PS50280; SET; 2.
DR PROSITE; PS50016; ZF_PHD_2; 1.
PE 4: Predicted;
KW Chromatin regulator {ECO:0000256|ARBA:ARBA00022853};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000027138};
KW S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 1730..1780
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT DOMAIN 1876..1997
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS51805"
FT DOMAIN 2097..2226
FT /note="SET"
FT /evidence="ECO:0000259|PROSITE:PS50280"
FT DOMAIN 2284..2405
FT /note="SET"
FT /evidence="ECO:0000259|PROSITE:PS50280"
FT DOMAIN 2413..2429
FT /note="Post-SET"
FT /evidence="ECO:0000259|PROSITE:PS50868"
FT REGION 587..608
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1332..1353
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1634..1660
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1698..1721
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 587..601
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1332..1346
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2429 AA; 268037 MW; B061DE7A19C07A4D CRC64;
MDCKELVGLF IGLVGKLNGG PLASTGHPHY VLVQGSFSRA NYIVKEKRRV PNDKENYNTT
PPLRDRKAQR LLKSEANNHY PGQGSPPQSA FIGSDGGGLG FREVSEMDSS WKVKFGSTLQ
SSMPALASST SREARDQMEI ISSQYVYSHA GQDLRSQMHA KMPNPSFPNI ANLSSCSSSH
TDLGSSFVAL LSGPASFLHF DFQGLSNPKP FSSSSKLPIE IGNITVSPTG SQVPVTSSGL
LSENGSYQNL RSGADLCSIV SSRTMASSNS VFQHGLLPAN ISLKGSGLTK TVSHQAVLGN
EKIKDFASLR GEWHGMPLAD AVKLQNVNNL IPQRFPVEAE SSALSVSSTS TSGCPRVFCL
DRSGDLLLSN TGLLGILCSC HCFHMSVAKF CEHSGVLNVN PGDAVRMDSG ETIAQWRKLY
FQKFGIRVPE DQSGWDWPEG LPLTASLVKS GVTMSNIVKN SDCSNLVGAS GGSVRSGQSL
GDVFPANFLA DHNSVIDALH DKQQRNGQDS NKFYLKGLVA SSQSNSCSVG DNHMTDCSIS
RCMTMPELAG RGPENISQSI YIDAVLKSRS LAAMNQTLQN HRITVNDSDV SRSRDARGGT
NMDKDASSSG IELKLGQPYQ QSQAPRTPVS PVVGQFCNTL VNSQRPFCQE QMIHNVTSCR
GEEESGIFLP CPVGLSNFTS RREQEQLNYG NCVNNNMMNA AKSELLGGNV AKPSVVSLFK
HCNLPEGSSH SMTTSNLFNV GEHVRLGTKQ CESHAVKAWN SGNGIDRQNM VPQSGFLKPA
DKGKGVEGLG KSYTETTLGS KMHNHAENPS SSTGVVAGNS YSVFPHAHDK NRYSHYSPNV
LPDASDAGNF SNYLENVPCF GSSGPADHVF LRSMGSTMAS RQLLSSSAVP LDSNLSSSTA
IPGLTPAMPN QESIGIPHLL DDNLRWLALG QILELSKQQH ALASLGKNLE QGKCSNSSDV
KVQHSFVEPS MAKEQMPAHN LNWKQGISEV ALKSDQSGPT IWNSLVVVRT VDSSMTFCVL
PGLNRWCKFS TFTQGMSLHC KEIGMHCQSS HSPLQNEQPL LRLGRCQNNT PHSNEHESCC
PRTLYFQYNC SCPAHNCIGG QCNFGVGNPP NSVREETGSV SCKTPMIIAS QFAKDHVNPK
ENAVSDQYGN LRGQLSRKIS FCASQWKDVP SKVKRVPEVA CVKASPDALY ERGHELRQLE
DNAAKCSNGA VHRADSLKKQ DISNISSGCS TPAVTQASIE VTDVDSSTVG NNEYANNLVI
DEGSGIDKCW SSDDAFESDR TADFCGASYK TNLRKEGSHK VFGTKSSRSL LDEVKLMDSL
TWKRGRNQKQ CGTTDCGKTN QSQESEKGMK TGKRKREIEL KMLDAPLCTK VPVVHCKSLE
CDVTVDRPFL SNNVQLVSSG LDSSWTSGAS FKTDLKHGNS ALSVTKTLSC KRDLCRFYNA
GDGHDHGTES NHNDNSCNMI GISGRKKFRR TRTADICMPF QMQELTQAVG EKILKNDTVS
WIKPSSSRQV NLCYRKAKPV VCGKYGEISN GHVTGEVTKP VKIFPLDKIL KTARRCSLPK
NCKPGLTSSR GWKRTNFRWN NVCSDKFFNL AKEKENNRND GLICEEMNVD PSLKEAFLSG
DEQSADEFSI LEKREDKNEK GDDPLDSSSH VQTKPKYKET RKRSLYELTL KGKSPSPKMI
SQRKIFKCEP KMKLQKNLKN SNRSQVRGSW KVDAKRHVRK QKHPSVTDMD SFCCVCGSSN
KDEVNDLLEC GQCSIRVHQA CYGVSKVPKG LWYCRPCKTN SKNIVCVLCG YGGGAMTQAL
RSRTIVKTLL KAWNLETECR QLNSIPSAEI VQEEFNILHS SGSIPENSPY AVVRPTNIEP
STSTICNMDV QNQSDILQSS LCRVSNLKVH TSITAGVLDS NVKQWVHMVC GLWTPGTRCP
NVDTMSAFDV SGISRPKTNA VCSVCNRPGG SCIQCRVENC SVQFHPWCAH QKGLLQSEAE
GVDNENVGFY GRCELHATYT ASQLTCDVDD IEAGCTGESC ARTEGYKGRK RDGFWHSINW
QSKGKGGCLV PQEQLNAWIH INGQKSCSQG LLKLPISEKE YDCRKEYARY KQLKGWKHLV
VYKSGIHALG LYTSRFICRG EMVVEYVGEI VGQRVADKRE NEYQCGRKLQ YKSACYFFRI
DKEHIIDATQ KGGIARFVNH SCLPNCVAKV ISVRTEKKMK ERRSLVFAMY KGYKGRKRDG
FWHSINWQSK GKGGCLVPQE QLNAWIHING QKSCSQGLLK LPISEKEYDC RKEYARYKQL
KGWKHLVVYK SGIHALGLYT SRFICRGEMV VEYVGEIVGQ RVADKRENEY QCGRKLQYKS
ACYFFRIDKE HIIDATQKGG IARFVNHSCL PNCVAKVISV RTEKKVVFFA ERDIYPGEEI
TYDYHFNHED EGKKIPCFCN SKNCRRYLN
//
