ID A0A068QKD6_9VIRU Unreviewed; 997 AA.
AC A0A068QKD6;
DT 01-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2014, sequence version 1.
DT 24-JAN-2024, entry version 32.
DE RecName: Full=DNA-directed RNA polymerase subunit {ECO:0000256|RuleBase:RU004279};
DE EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};
GN Name=120R {ECO:0000313|EMBL:CCV02492.1};
GN ORFNames=IIV31_120R {ECO:0000313|EMBL:CCV02492.1};
OS Armadillidium vulgare iridescent virus.
OC Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Megaviricetes;
OC Pimascovirales; Iridoviridae; Betairidovirinae; Iridovirus;
OC Invertebrate iridescent virus 31.
OX NCBI_TaxID=72201 {ECO:0000313|EMBL:CCV02492.1, ECO:0000313|Proteomes:UP000114278};
RN [1] {ECO:0000313|EMBL:CCV02492.1, ECO:0000313|Proteomes:UP000114278}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24722681; DOI=10.1099/vir.0.066076-0;
RA Piegu B., Guizard S., Yeping T., Cruaud C., Asgari S., Bideshi D.K.,
RA Federici B.A., Bigot Y.;
RT "Genome sequence of a crustacean iridovirus, IIV31, isolated from the pill
RT bug, Armadillidium vulgare.";
RL J. Gen. Virol. 95:1585-1590(2014).
CC -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC {ECO:0000256|RuleBase:RU004279}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000256|ARBA:ARBA00024550,
CC ECO:0000256|RuleBase:RU004279};
CC -!- SIMILARITY: Belongs to the RNA polymerase beta' chain family.
CC {ECO:0000256|ARBA:ARBA00006460, ECO:0000256|RuleBase:RU004279}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; HF920637; CCV02492.1; -; Genomic_DNA.
DR RefSeq; YP_009046734.1; NC_024451.1.
DR GeneID; 19738704; -.
DR KEGG; vg:19738704; -.
DR Proteomes; UP000114278; Genome.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR Gene3D; 1.10.132.30; -; 1.
DR Gene3D; 2.40.40.20; -; 2.
DR Gene3D; 6.10.250.2940; -; 1.
DR Gene3D; 6.20.50.80; -; 1.
DR Gene3D; 4.10.860.120; RNA polymerase II, clamp domain; 1.
DR Gene3D; 1.10.274.100; RNA polymerase Rpb1, domain 3; 1.
DR InterPro; IPR045867; DNA-dir_RpoC_beta_prime.
DR InterPro; IPR000722; RNA_pol_asu.
DR InterPro; IPR006592; RNA_pol_N.
DR InterPro; IPR007080; RNA_pol_Rpb1_1.
DR InterPro; IPR007066; RNA_pol_Rpb1_3.
DR InterPro; IPR042102; RNA_pol_Rpb1_3_sf.
DR InterPro; IPR007083; RNA_pol_Rpb1_4.
DR InterPro; IPR007081; RNA_pol_Rpb1_5.
DR InterPro; IPR044893; RNA_pol_Rpb1_clamp_domain.
DR InterPro; IPR038120; Rpb1_funnel_sf.
DR PANTHER; PTHR19376; DNA-DIRECTED RNA POLYMERASE; 1.
DR PANTHER; PTHR19376:SF37; DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1; 1.
DR Pfam; PF04997; RNA_pol_Rpb1_1; 1.
DR Pfam; PF00623; RNA_pol_Rpb1_2; 2.
DR Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR SMART; SM00663; RPOLA_N; 1.
DR SUPFAM; SSF64484; beta and beta-prime subunits of DNA dependent RNA-polymerase; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW ECO:0000256|RuleBase:RU004279};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695,
KW ECO:0000256|RuleBase:RU004279};
KW Reference proteome {ECO:0000313|Proteomes:UP000114278};
KW Transcription {ECO:0000256|ARBA:ARBA00023163,
KW ECO:0000256|RuleBase:RU004279};
KW Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|RuleBase:RU004279}.
FT DOMAIN 207..610
FT /note="RNA polymerase N-terminal"
FT /evidence="ECO:0000259|SMART:SM00663"
SQ SEQUENCE 997 AA; 112184 MW; 5F2511A989223751 CRC64;
METEVKEINS IIFGILSADD MREMSAFEVK EAKISTNNLH DTVHDPRSGP IGSSLCETCN
QTEWDCPGHF GHIELNAPIL HPLFLSHIVN ILNIFCYNCN EFILTKDHLE LNNILKLEKE
KRFNAVVDKI KKCDKCIHCS AFKAEYKIGA SDITYKTIYR SFPKGKITDE KIEKEREREV
MTAEMVKKLF ENIKTEYVEM LEMSHPKDYC LTVFPVIPSC CRPYEIQDGN INDDDLTYQL
MEIVKNNSMI GIISKQIEDL GRTDDKDNAL DGAVKAEVEE LKTKYVKYVN NLKFRIETYC
NNSKGKATHA TTGRAIKGLR ERLTGKEGQI RTNLLGKRCE MSGRTVVGPD PTLKIDEMGL
PRDMAVSLSV PVIVNKYNME EVTKIVNAGQ AIRIVKKKGG DGPNKDQEIK INLSAAMTCN
GTMLQHDDVV MRKRDLENQR FSGFWPGVLG TPVGVPSGED EFFSIVIRDT KNFTLKAGDK
LFRKDSEIFP IVLPTKRHIT LEEGDIVHRH LKDGDVVFLN RQPTLHKGSM MAFKIKIRNS
KTILINPACA SPFNADFDGD EMNVHVPQSV EAQIELLTLS TPKQCLISSQ AGKPSLTIVQ
DSLTGAYLMS LENNNTKSIE IHERNDILMV LSHPLGLKEC PVNYFLKREE EISETLKKLG
KFGLKDKDGK PFSGETLNGR GLLSLLLPRD LTVTNADLKI TRGVIHFGFL SKKYLSSTET
SLIKVLFKEY GVETCTAFIE NVQFLTNKWL LISSFSIHAG DCIKHKEILG TIEECLMEAE
KIKLTTKNPF VMENKITQAL SNAKDIGMKI AKDALIKEGK NKNNFLTTVE SGSKGDYFNL
AQITGLLGQQ NIQGQRIKPV LNNETRTLPH YPFPGTTDIP LIEEYESKGF ISSSFAQGLT
PREFIFHSSS GRVGVTDTAL STAQSGYNMR RIVKITEDIK IQYDGTVQDT HKRRFQMAYG
GLGYDPSKTV KVNGKSQVCD VSRLVNRMND NFERENE
//
