ID A0A068U0A0_COFCA Unreviewed; 1071 AA.
AC A0A068U0A0;
DT 01-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE RecName: Full=FYVE-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=GSCOC_T00036834001 {ECO:0000313|EMBL:CDP01697.1};
OS Coffea canephora (Robusta coffee).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex;
OC Bertiereae - Coffeeae clade; Coffeeae; Coffea.
OX NCBI_TaxID=49390 {ECO:0000313|EMBL:CDP01697.1, ECO:0000313|Proteomes:UP000295252};
RN [1] {ECO:0000313|Proteomes:UP000295252}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DH200-94 {ECO:0000313|Proteomes:UP000295252};
RX PubMed=25190796; DOI=10.1126/science.1255274;
RA Denoeud F., Carretero-Paulet L., Dereeper A., Droc G., Guyot R.,
RA Pietrella M., Zheng C., Alberti A., Anthony F., Aprea G., Aury J.M.,
RA Bento P., Bernard M., Bocs S., Campa C., Cenci A., Combes M.C.,
RA Crouzillat D., Da Silva C., Daddiego L., De Bellis F., Dussert S.,
RA Garsmeur O., Gayraud T., Guignon V., Jahn K., Jamilloux V., Joet T.,
RA Labadie K., Lan T., Leclercq J., Lepelley M., Leroy T., Li L.T.,
RA Librado P., Lopez L., Munoz A., Noel B., Pallavicini A., Perrotta G.,
RA Poncet V., Pot D., Priyono X., Rigoreau M., Rouard M., Rozas J.,
RA Tranchant-Dubreuil C., VanBuren R., Zhang Q., Andrade A.C., Argout X.,
RA Bertrand B., de Kochko A., Graziosi G., Henry R.J., Jayarama X., Ming R.,
RA Nagai C., Rounsley S., Sankoff D., Giuliano G., Albert V.A., Wincker P.,
RA Lashermes P.;
RT "The coffee genome provides insight into the convergent evolution of
RT caffeine biosynthesis.";
RL Science 345:1181-1184(2014).
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DR EMBL; HG739091; CDP01697.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A068U0A0; -.
DR STRING; 49390.A0A068U0A0; -.
DR EnsemblPlants; CDP01697; CDP01697; GSCOC_T00036834001.
DR Gramene; CDP01697; CDP01697; GSCOC_T00036834001.
DR InParanoid; A0A068U0A0; -.
DR OMA; VDHDFVQ; -.
DR PhylomeDB; A0A068U0A0; -.
DR Proteomes; UP000295252; Chromosome 7.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd00065; FYVE_like_SF; 1.
DR CDD; cd13365; PH_PLC_plant-like; 1.
DR Gene3D; 2.30.29.30; Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB); 1.
DR Gene3D; 2.130.10.30; Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II; 3.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR013591; Brevis_radix_dom.
DR InterPro; IPR027988; BRX_N.
DR InterPro; IPR011993; PH-like_dom_sf.
DR InterPro; IPR001849; PH_domain.
DR InterPro; IPR009091; RCC1/BLIP-II.
DR InterPro; IPR000408; Reg_chr_condens.
DR InterPro; IPR000306; Znf_FYVE.
DR InterPro; IPR017455; Znf_FYVE-rel.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR22870:SF350; F12P19.9 PROTEIN; 1.
DR PANTHER; PTHR22870; REGULATOR OF CHROMOSOME CONDENSATION; 1.
DR Pfam; PF08381; BRX; 1.
DR Pfam; PF13713; BRX_N; 1.
DR Pfam; PF01363; FYVE; 1.
DR Pfam; PF16457; PH_12; 1.
DR Pfam; PF00415; RCC1; 5.
DR PRINTS; PR00633; RCCNDNSATION.
DR SMART; SM00064; FYVE; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR SUPFAM; SSF50729; PH domain-like; 1.
DR SUPFAM; SSF50985; RCC1/BLIP-II; 1.
DR PROSITE; PS51514; BRX; 1.
DR PROSITE; PS00626; RCC1_2; 1.
DR PROSITE; PS50012; RCC1_3; 6.
DR PROSITE; PS50178; ZF_FYVE; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000295252};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00091}.
FT REPEAT 312..363
FT /note="RCC1"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT REPEAT 364..418
FT /note="RCC1"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT REPEAT 419..470
FT /note="RCC1"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT REPEAT 482..533
FT /note="RCC1"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT REPEAT 534..585
FT /note="RCC1"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT REPEAT 586..637
FT /note="RCC1"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT DOMAIN 642..704
FT /note="FYVE-type"
FT /evidence="ECO:0000259|PROSITE:PS50178"
FT DOMAIN 1002..1057
FT /note="BRX"
FT /evidence="ECO:0000259|PROSITE:PS51514"
SQ SEQUENCE 1071 AA; 117904 MW; 5EEE7C7E69FDA0B6 CRC64;
MGEEHVALCP SDRAVEQAIV ALKKGAHLLK YGRRGKPKFC PFRLSMDEKS LIWYSGEMEK
QLKLSSVTNI IRGQNTKQMK PERESQSFAL IYANGERSLD LICKDKAQAD SWFLGLKSII
SRSHHRRLFG TLKNQRWAQS CVNSPASYMR RKQILGITEE TAKSSQFQSI DGSPAQSFSE
RCFSDGLSCS SDSFYSESSL SSTQNSVDNF NTSSPCLGPD DLNKKEAVCA NTRTHVHSLS
QLGRPPRNFT QLGMDVLRDL LIWGGGVEGG CFAGGEEQCD ALIPKVLDST MMLDVQSVSL
GGKHAALVTK QGEVFCWGEG KRGRLGHKLD MDSECPKIVD SLSGVFVKSV KCGEYQTCAL
ADSGELYTWG DGGCSADSAG GDTKQSHWLP TRLCGLQDGV SIANVACGAW HTAIVSANGQ
LFTFGDGTFG VLGHGNVQSI SRPKEVESLV GLWVKSVACG PWHTAAIVEV VTDCFKIKRK
GGKLFTWGDG DKGKLGHSDQ ERKLLPTCVT ELVDQDFVQV ACGRVLTAGL TNMGKIYSMG
SAEHGQLGNP HARDKSITIV QGKLKDEYVK EISVGSSHIA ALTSRGNVFT WGKGANGQLG
LGDRRDRNSP TLVEALRDRQ VEHITCGSSS TAAICLHKSV ATTDQSACKG CGTAFGFTRK
KQNCYNCGLL FCRACCSKKA SNASLAPSKV KSFRVCDPCF KKLQKIADSD GQYKLDSQSP
RLLLTSLKAM SDEKEYRGDG SGAWSRMKLT TNYSEEKVQG DKQQPLDSTS SSLGGLHRWG
QVPCPQAFRI NSGDQRIPHL SSLSPLRTQL ASSSPANFQA LPLVVKSASF AAMNQEKDAL
QSDEFLLEEI RKLRIQSESL KKLCQTRDEE IQECRRKLEE VWALAKEEAA KSKAAKEVIK
ALTSRLQTMS EKLSAERDLK DQGSVEKFTS ISSSQVVTTC EPPEVCRMED RRVDSVCNSP
MLFSNTLKYL RDKHRNGDAA SVEKSCAEKV DTEQLGIKSL KLEWVEQYQP GIYITLTALP
NGQKALRRVR FSRKKFSERE AERWWDENQL LVYQKFEIEE YTSSNQGMMV L
//
