ID A0A068UK62_COFCA Unreviewed; 606 AA.
AC A0A068UK62;
DT 01-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE RecName: Full=Transcription factor {ECO:0000256|RuleBase:RU369104};
DE Short=bHLH transcription factor {ECO:0000256|RuleBase:RU369104};
DE AltName: Full=Basic helix-loop-helix protein {ECO:0000256|RuleBase:RU369104};
GN ORFNames=GSCOC_T00027710001 {ECO:0000313|EMBL:CDP08667.1};
OS Coffea canephora (Robusta coffee).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex;
OC Bertiereae - Coffeeae clade; Coffeeae; Coffea.
OX NCBI_TaxID=49390 {ECO:0000313|EMBL:CDP08667.1, ECO:0000313|Proteomes:UP000295252};
RN [1] {ECO:0000313|Proteomes:UP000295252}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DH200-94 {ECO:0000313|Proteomes:UP000295252};
RX PubMed=25190796; DOI=10.1126/science.1255274;
RA Denoeud F., Carretero-Paulet L., Dereeper A., Droc G., Guyot R.,
RA Pietrella M., Zheng C., Alberti A., Anthony F., Aprea G., Aury J.M.,
RA Bento P., Bernard M., Bocs S., Campa C., Cenci A., Combes M.C.,
RA Crouzillat D., Da Silva C., Daddiego L., De Bellis F., Dussert S.,
RA Garsmeur O., Gayraud T., Guignon V., Jahn K., Jamilloux V., Joet T.,
RA Labadie K., Lan T., Leclercq J., Lepelley M., Leroy T., Li L.T.,
RA Librado P., Lopez L., Munoz A., Noel B., Pallavicini A., Perrotta G.,
RA Poncet V., Pot D., Priyono X., Rigoreau M., Rouard M., Rozas J.,
RA Tranchant-Dubreuil C., VanBuren R., Zhang Q., Andrade A.C., Argout X.,
RA Bertrand B., de Kochko A., Graziosi G., Henry R.J., Jayarama X., Ming R.,
RA Nagai C., Rounsley S., Sankoff D., Giuliano G., Albert V.A., Wincker P.,
RA Lashermes P.;
RT "The coffee genome provides insight into the convergent evolution of
RT caffeine biosynthesis.";
RL Science 345:1181-1184(2014).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|RuleBase:RU369104}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; HG739119; CDP08667.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A068UK62; -.
DR STRING; 49390.A0A068UK62; -.
DR EnsemblPlants; CDP08667; CDP08667; GSCOC_T00027710001.
DR Gramene; CDP08667; CDP08667; GSCOC_T00027710001.
DR InParanoid; A0A068UK62; -.
DR OMA; DTVYHTF; -.
DR PhylomeDB; A0A068UK62; -.
DR Proteomes; UP000295252; Chromosome 2.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR CDD; cd11449; bHLH_AtAIB_like; 1.
DR Gene3D; 4.10.280.10; Helix-loop-helix DNA-binding domain; 1.
DR InterPro; IPR045084; AIB/MYC-like.
DR InterPro; IPR011598; bHLH_dom.
DR InterPro; IPR036638; HLH_DNA-bd_sf.
DR InterPro; IPR025610; MYC/MYB_N.
DR PANTHER; PTHR11514; MYC; 1.
DR PANTHER; PTHR11514:SF47; TRANSCRIPTION FACTOR BHLH13; 1.
DR Pfam; PF14215; bHLH-MYC_N; 1.
DR Pfam; PF00010; HLH; 1.
DR SMART; SM00353; HLH; 1.
DR SUPFAM; SSF47459; HLH, helix-loop-helix DNA-binding domain; 1.
DR PROSITE; PS50888; BHLH; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|RuleBase:RU369104};
KW Reference proteome {ECO:0000313|Proteomes:UP000295252};
KW Transcription {ECO:0000256|ARBA:ARBA00023163,
KW ECO:0000256|RuleBase:RU369104};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015,
KW ECO:0000256|RuleBase:RU369104}.
FT DOMAIN 435..484
FT /note="BHLH"
FT /evidence="ECO:0000259|PROSITE:PS50888"
FT REGION 410..446
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 474..501
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 606 AA; 66434 MW; 48EA69A1CBCCFECC CRC64;
MKFEVGMGGL IWNDEDKTVV AAVLGTKAFD YLFSSSLSAE GSLMAMGNDE NLQNKLSDLV
EHPNSSNFSW NYAIFWQISR SKSGDLVLGW GDGCCREPRE GEESEVTRIL NLRLEDETQQ
RMRKRVLQKL HTCFGGSDED SYAFGLDRVT DTEMFFLASM YFSFPRGEGG PGKSFGSGKH
LWVSDALKSS ADYCVRSFLA KSAGMQTLVL IPTDVGVVEL GSVRSIPESL ELVQSARSSF
SSFSSFIRAK QAAAVVMGAD KKDGNAPCPN LGIGERPDGI PKIFGQDLNP GNPQSREKLA
IRKPNEEHWD GYPNGNRIAF PSPRNGIHGA TWTTFGHVKP GNGAELYSPQ TQTSKLQGLV
NGSGDEFRLG SFQHQKPTQM QIDFTGATSR PVISRPLCVD SEHSDVEASC KEDVSVLGDE
KRPRKRGRKP ANGREEPLNH VEAERQRREK LNQRFYALRA VVPNISKMDK ASLLGDAIAY
ITELQKKLKD MESERDKFGS ASRDALTSEA SPSSDVQSLV PEIDIQGAHD KVIVKVSCPL
DTHPASRVIH GLKEAGVNVI ESKLAAGNDK VFHTFVVKPQ GSEQLTKDKL IAAISRSCES
TSLQAL
//
