ID A0A068UWU1_COFCA Unreviewed; 1367 AA.
AC A0A068UWU1;
DT 01-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2014, sequence version 1.
DT 13-SEP-2023, entry version 32.
DE RecName: Full=Protein TONSOKU {ECO:0008006|Google:ProtNLM};
GN ORFNames=GSCOC_T00037757001 {ECO:0000313|EMBL:CDP13020.1};
OS Coffea canephora (Robusta coffee).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex;
OC Bertiereae - Coffeeae clade; Coffeeae; Coffea.
OX NCBI_TaxID=49390 {ECO:0000313|EMBL:CDP13020.1, ECO:0000313|Proteomes:UP000295252};
RN [1] {ECO:0000313|Proteomes:UP000295252}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DH200-94 {ECO:0000313|Proteomes:UP000295252};
RX PubMed=25190796; DOI=10.1126/science.1255274;
RA Denoeud F., Carretero-Paulet L., Dereeper A., Droc G., Guyot R.,
RA Pietrella M., Zheng C., Alberti A., Anthony F., Aprea G., Aury J.M.,
RA Bento P., Bernard M., Bocs S., Campa C., Cenci A., Combes M.C.,
RA Crouzillat D., Da Silva C., Daddiego L., De Bellis F., Dussert S.,
RA Garsmeur O., Gayraud T., Guignon V., Jahn K., Jamilloux V., Joet T.,
RA Labadie K., Lan T., Leclercq J., Lepelley M., Leroy T., Li L.T.,
RA Librado P., Lopez L., Munoz A., Noel B., Pallavicini A., Perrotta G.,
RA Poncet V., Pot D., Priyono X., Rigoreau M., Rouard M., Rozas J.,
RA Tranchant-Dubreuil C., VanBuren R., Zhang Q., Andrade A.C., Argout X.,
RA Bertrand B., de Kochko A., Graziosi G., Henry R.J., Jayarama X., Ming R.,
RA Nagai C., Rounsley S., Sankoff D., Giuliano G., Albert V.A., Wincker P.,
RA Lashermes P.;
RT "The coffee genome provides insight into the convergent evolution of
RT caffeine biosynthesis.";
RL Science 345:1181-1184(2014).
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DR EMBL; HG739156; CDP13020.1; -; Genomic_DNA.
DR STRING; 49390.A0A068UWU1; -.
DR EnsemblPlants; CDP13020; CDP13020; GSCOC_T00037757001.
DR Gramene; CDP13020; CDP13020; GSCOC_T00037757001.
DR InParanoid; A0A068UWU1; -.
DR OMA; VKPCCRK; -.
DR PhylomeDB; A0A068UWU1; -.
DR Proteomes; UP000295252; Chromosome 8.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR GO; GO:0040029; P:epigenetic regulation of gene expression; IEA:InterPro.
DR GO; GO:0009933; P:meristem structural organization; IEA:InterPro.
DR GO; GO:0072423; P:response to DNA damage checkpoint signaling; IEA:InterPro.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR044227; TONSOKU.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR47684; PROTEIN TONSOKU; 1.
DR PANTHER; PTHR47684:SF1; PROTEIN TONSOKU; 1.
DR Pfam; PF13424; TPR_12; 1.
DR Pfam; PF13176; TPR_7; 2.
DR SMART; SM00368; LRR_RI; 6.
DR SMART; SM00028; TPR; 7.
DR SUPFAM; SSF52047; RNI-like; 1.
DR SUPFAM; SSF48452; TPR-like; 3.
DR PROSITE; PS50005; TPR; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000295252};
KW TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT REPEAT 250..283
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REGION 506..553
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1259..1281
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 3..30
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 303..330
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 539..553
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1367 AA; 152423 MW; 200063217B631148 CRC64;
MRKNNDEQQL RDAKRAYKEA KEVGNRAEEA RWANYIGNIH KNRGEYVQAL KWLRIDYDVS
SNFLPDKQLL PTCNTLGELY LRLQDFKDAL KIQKKHLQLA EDTNDLIEQQ RACTQLGRTY
HEMFMKSDDD HSSIKNAKKY FKSAMKLAKN LMRNPSSCKS TFVAEYVDAH NNIGMLEIDL
DNLEEAQTIL SRGLEICDEE ELSENHDGRS RLHHNLGIVY MELRKWDKAR EHMDEDISIC
NRIGHCQGEA KGYINLGELH YRVQKYDEAI NCYHMALQQA ESMEDEDVLV SQIEQNIKTV
KAAINVMDEI KKDEQNLKRL ARNMQLARGT AGERKCLLQQ VASLDRLIEK SSMIFAWMKH
LEYAKKRKKI ANEICDKEKM GDSFLLIGES YQKLRKFKKA LKWHTKSWET YNLIGNLEGQ
ALSKIDIGNA LDSNGNWMEA FKAFEEGYRQ VSSPITFSLL IAVEANMPSA QLSALENMHY
SQMIRFDDVD KARSLKSLID KLKHLTPKET QGQDMPNDCS ETETEIDDLS LNPPEVRISP
ERSISNASRS KSLSANDLSE NAPLISFLRN GKSAEKLRAV HDATVETAVK LPESSPRKAS
IASGSQAAGR KRIRLVLSDD ESENDGEHTS RRTAYNFHAE EVATSNGCKS IPILFLLYAY
TSSEDKSNLK SPVHELQDLS PVASRHAIST CTPVNLEESS CSHKSETSAL AAQDAKDFRD
PYRNKFDKSG NLNYKHNMSN LDPSACCAES CQHMIFKVND DFVHLEPDSC MLGDELSMEQ
LKVGVACLYY LQLPSVKRAK GLVPDVQDLK RDGKVLETLE AGDELKNHTF GNNIFEVSLG
VWVPKPVMKL YVDCCKELSE QPDLKVLKKL YNLEVSEDEV IVSDCGLQDI SVAPLLNALH
AHKTVAVIDF SHNLLGNGTM ERLKQVFTSS GQDYGALVLD LHCNLLGPTA LFQICECPVL
YNRLEVLNVS GNRLTDACAS YLSTILKKCK ALYTLNVEKC SITSRTIQKI ADSLDSGSVL
AHLSLGHNNP ISGNVIINLF VKICSLKRFQ ELDLTGIKLS KPVVDSLCQL ATNSCLSGLI
LGGSYIGTDG ALQLTKSLAN ETQELVKLDL SSCGLTSDYI VRLNIEVSLI YGILELNLGG
NPLMQEGGKA LASLVANPQC GLKVLVLSKC QLGPVGILRI LEELACNSSL EELNLAENIH
PESNASECCL IPLKEGSNFK QTNPNLPESL LEAYASKEVQ GSPQELCTVN AEYNQLEVAD
SDDDTTGEKV APSGLSDNPI DSSQKKELRL ESNFIPDILA AISRAKHLLS LDLSDNGFCQ
SVAEKLYTAW SASSRAGLAQ SHIQDNMIHL SVRGHKCCGV RPCCRRI
//
