ID A0A068UZD7_COFCA Unreviewed; 443 AA.
AC A0A068UZD7;
DT 01-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE RecName: Full=U-box domain-containing protein {ECO:0000259|PROSITE:PS51698};
GN ORFNames=GSCOC_T00039043001 {ECO:0000313|EMBL:CDP13905.1};
OS Coffea canephora (Robusta coffee).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex;
OC Bertiereae - Coffeeae clade; Coffeeae; Coffea.
OX NCBI_TaxID=49390 {ECO:0000313|EMBL:CDP13905.1, ECO:0000313|Proteomes:UP000295252};
RN [1] {ECO:0000313|Proteomes:UP000295252}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DH200-94 {ECO:0000313|Proteomes:UP000295252};
RX PubMed=25190796; DOI=10.1126/science.1255274;
RA Denoeud F., Carretero-Paulet L., Dereeper A., Droc G., Guyot R.,
RA Pietrella M., Zheng C., Alberti A., Anthony F., Aprea G., Aury J.M.,
RA Bento P., Bernard M., Bocs S., Campa C., Cenci A., Combes M.C.,
RA Crouzillat D., Da Silva C., Daddiego L., De Bellis F., Dussert S.,
RA Garsmeur O., Gayraud T., Guignon V., Jahn K., Jamilloux V., Joet T.,
RA Labadie K., Lan T., Leclercq J., Lepelley M., Leroy T., Li L.T.,
RA Librado P., Lopez L., Munoz A., Noel B., Pallavicini A., Perrotta G.,
RA Poncet V., Pot D., Priyono X., Rigoreau M., Rouard M., Rozas J.,
RA Tranchant-Dubreuil C., VanBuren R., Zhang Q., Andrade A.C., Argout X.,
RA Bertrand B., de Kochko A., Graziosi G., Henry R.J., Jayarama X., Ming R.,
RA Nagai C., Rounsley S., Sankoff D., Giuliano G., Albert V.A., Wincker P.,
RA Lashermes P.;
RT "The coffee genome provides insight into the convergent evolution of
RT caffeine biosynthesis.";
RL Science 345:1181-1184(2014).
CC -!- PATHWAY: Protein modification; protein ubiquitination.
CC {ECO:0000256|ARBA:ARBA00004906}.
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DR EMBL; HG739162; CDP13905.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A068UZD7; -.
DR STRING; 49390.A0A068UZD7; -.
DR EnsemblPlants; CDP13905; CDP13905; GSCOC_T00039043001.
DR Gramene; CDP13905; CDP13905; GSCOC_T00039043001.
DR InParanoid; A0A068UZD7; -.
DR OMA; SKMAPNW; -.
DR PhylomeDB; A0A068UZD7; -.
DR UniPathway; UPA00143; -.
DR Proteomes; UP000295252; Chromosome 2.
DR GO; GO:0004842; F:ubiquitin-protein transferase activity; IEA:InterPro.
DR GO; GO:0016567; P:protein ubiquitination; IEA:UniProtKB-UniPathway.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR003613; Ubox_domain.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR33644:SF5; U-BOX DOMAIN-CONTAINING PROTEIN 62; 1.
DR PANTHER; PTHR33644; U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED; 1.
DR Pfam; PF04564; U-box; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS51698; U_BOX; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000295252}.
FT DOMAIN 260..332
FT /note="U-box"
FT /evidence="ECO:0000259|PROSITE:PS51698"
FT REGION 1..70
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 91..147
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 331..363
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 48..62
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 91..118
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 119..147
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 331..354
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 443 AA; 48344 MW; 69E676C22E7E65C6 CRC64;
MASEDMGLVQ AQQRLDNGLS HPHPHLVFPD NSFSCGPPPP QPPRRVSAAG LSSKTTATRE
LTSGFIDHHH YFHQPPSADF RRATFSSPSS AAAAAASHPD NSHNWNLGSR ASATTSGGDG
SEDDDDDDDE EEEDDDDDHN NDDDDENEVE GIAASNENIN KNSRGKMASQ KLKQLSSFGL
KEGNVVGVAG RSGNEINNNC EMRNAVTIAD ADGEMYYSQY LQGTAEVGPH ARQKDVLVVE
NGCGFSGRKE GSYLAESGDS LREILSDPLT GALMDDAMIL PCGHSFGSGG IQHVLRMKSC
YTCSQAVSED SVSPNLSLRL AVQAFRREEE LQVHRASKRR RERHEQDKGT YGDSVQTDHP
RGRGVQFPFA VTDRVIIKGN KRTPPRFVGR EAIVTTQCLN GWYVVKTLDN AESVKLQYRS
LARVPDNPSP KPIATSKITP NWL
//
