ID A0A068V839_COFCA Unreviewed; 735 AA.
AC A0A068V839;
DT 01-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE RecName: Full=Bromo domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=GSCOC_T00019126001 {ECO:0000313|EMBL:CDP16664.1};
OS Coffea canephora (Robusta coffee).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex;
OC Bertiereae - Coffeeae clade; Coffeeae; Coffea.
OX NCBI_TaxID=49390 {ECO:0000313|EMBL:CDP16664.1, ECO:0000313|Proteomes:UP000295252};
RN [1] {ECO:0000313|Proteomes:UP000295252}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DH200-94 {ECO:0000313|Proteomes:UP000295252};
RX PubMed=25190796; DOI=10.1126/science.1255274;
RA Denoeud F., Carretero-Paulet L., Dereeper A., Droc G., Guyot R.,
RA Pietrella M., Zheng C., Alberti A., Anthony F., Aprea G., Aury J.M.,
RA Bento P., Bernard M., Bocs S., Campa C., Cenci A., Combes M.C.,
RA Crouzillat D., Da Silva C., Daddiego L., De Bellis F., Dussert S.,
RA Garsmeur O., Gayraud T., Guignon V., Jahn K., Jamilloux V., Joet T.,
RA Labadie K., Lan T., Leclercq J., Lepelley M., Leroy T., Li L.T.,
RA Librado P., Lopez L., Munoz A., Noel B., Pallavicini A., Perrotta G.,
RA Poncet V., Pot D., Priyono X., Rigoreau M., Rouard M., Rozas J.,
RA Tranchant-Dubreuil C., VanBuren R., Zhang Q., Andrade A.C., Argout X.,
RA Bertrand B., de Kochko A., Graziosi G., Henry R.J., Jayarama X., Ming R.,
RA Nagai C., Rounsley S., Sankoff D., Giuliano G., Albert V.A., Wincker P.,
RA Lashermes P.;
RT "The coffee genome provides insight into the convergent evolution of
RT caffeine biosynthesis.";
RL Science 345:1181-1184(2014).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; HG739219; CDP16664.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A068V839; -.
DR STRING; 49390.A0A068V839; -.
DR EnsemblPlants; CDP16664; CDP16664; GSCOC_T00019126001.
DR Gramene; CDP16664; CDP16664; GSCOC_T00019126001.
DR InParanoid; A0A068V839; -.
DR OMA; NARAEPC; -.
DR PhylomeDB; A0A068V839; -.
DR Proteomes; UP000295252; Chromosome 7.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR CDD; cd05506; Bromo_plant1; 1.
DR Gene3D; 1.20.1270.220; -; 1.
DR Gene3D; 1.20.920.10; Bromodomain-like; 1.
DR InterPro; IPR001487; Bromodomain.
DR InterPro; IPR036427; Bromodomain-like_sf.
DR InterPro; IPR037377; GTE_bromo.
DR InterPro; IPR027353; NET_dom.
DR InterPro; IPR038336; NET_sf.
DR PANTHER; PTHR46136:SF1; TRANSCRIPTION FACTOR GTE11-RELATED; 1.
DR PANTHER; PTHR46136; TRANSCRIPTION FACTOR GTE8; 1.
DR Pfam; PF17035; BET; 1.
DR Pfam; PF00439; Bromodomain; 1.
DR PRINTS; PR00503; BROMODOMAIN.
DR SMART; SM00297; BROMO; 1.
DR SUPFAM; SSF47370; Bromodomain; 1.
DR PROSITE; PS50014; BROMODOMAIN_2; 1.
DR PROSITE; PS51525; NET; 1.
PE 4: Predicted;
KW Bromodomain {ECO:0000256|PROSITE-ProRule:PRU00035};
KW Reference proteome {ECO:0000313|Proteomes:UP000295252}.
FT DOMAIN 187..259
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT DOMAIN 318..400
FT /note="NET"
FT /evidence="ECO:0000259|PROSITE:PS51525"
FT REGION 124..158
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 280..310
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 434..554
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 572..635
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 669..688
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 706..735
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 129..158
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 292..306
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 494..508
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 509..525
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 526..542
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 735 AA; 81680 MW; A70D1BD9809C0ACC CRC64;
MARKERFPDV YSTGVLPNYE SEGSGSSARL QAEITASEDS TAPRQKWVDI NSALRDGFDV
PVQVVPLSKL SLSEKKSLIL RLRSELEKIR VLQRKFQLLK TNAVTLSSSS DILSCSNVQR
AAPPVLDSRK SSAQVSRSGK KSSSSGNKAR GWNRGTSGRF ESVKQGTISN SNVGMMKQCE
VLLKKLMSHE YAWVFNTPVD IVKLNIPDYF TVIKQPMDLG KIKSRLGSGV YSSPLDFLAD
VKLTFSNAMT YNPPGNDVHI MADTMQKFFE ARWKTLEKKL PGNSSQSVPH KSELQEEAEV
VKPTAPSKKR KLSPLLHSVV QQPVKPRMTD EEKCNLSREL ESLLGDLPDN IVDFLREQIS
TAGESGEDEI EIDIYDLSDD VLFTLRKLLD GYLKEKQKND AKAEPCEIEL PNESGLSSSS
MQVDKGNDLV DEEVDIGGNE PPVSSYPAVE IERDGGLRSN RSNYKSDLGS TDHSDGEAEI
KAYTATKPTL DESDSPRVLQ EKEGGEDLTE GNQSVSGLDQ LEQSSQEKPN SDESDSRQDG
ESAPARRPVS PEKLYRAALL KNRFADTILK AREKTLGQGE KGNPEKLRRE REELELQKKR
EKARLQAEAK AAEDARRRAE EEAAAEARKK RELEREAARQ ALLQMEKTVE INENSRFLED
LEMLRSGPLE QLPSSVDETS PDHLQEGIGS CFKFGGNNPL EQLGLYMKVD EEDEEGEPPN
ALGSVNDDVE EGEID
//
