ID A0A068VEE5_COFCA Unreviewed; 477 AA.
AC A0A068VEE5;
DT 01-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE SubName: Full=DH200=94 genomic scaffold, scaffold_345 {ECO:0000313|EMBL:CDP19096.1};
GN ORFNames=GSCOC_T00008192001 {ECO:0000313|EMBL:CDP19096.1};
OS Coffea canephora (Robusta coffee).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex;
OC Bertiereae - Coffeeae clade; Coffeeae; Coffea.
OX NCBI_TaxID=49390 {ECO:0000313|EMBL:CDP19096.1, ECO:0000313|Proteomes:UP000295252};
RN [1] {ECO:0000313|Proteomes:UP000295252}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DH200-94 {ECO:0000313|Proteomes:UP000295252};
RX PubMed=25190796; DOI=10.1126/science.1255274;
RA Denoeud F., Carretero-Paulet L., Dereeper A., Droc G., Guyot R.,
RA Pietrella M., Zheng C., Alberti A., Anthony F., Aprea G., Aury J.M.,
RA Bento P., Bernard M., Bocs S., Campa C., Cenci A., Combes M.C.,
RA Crouzillat D., Da Silva C., Daddiego L., De Bellis F., Dussert S.,
RA Garsmeur O., Gayraud T., Guignon V., Jahn K., Jamilloux V., Joet T.,
RA Labadie K., Lan T., Leclercq J., Lepelley M., Leroy T., Li L.T.,
RA Librado P., Lopez L., Munoz A., Noel B., Pallavicini A., Perrotta G.,
RA Poncet V., Pot D., Priyono X., Rigoreau M., Rouard M., Rozas J.,
RA Tranchant-Dubreuil C., VanBuren R., Zhang Q., Andrade A.C., Argout X.,
RA Bertrand B., de Kochko A., Graziosi G., Henry R.J., Jayarama X., Ming R.,
RA Nagai C., Rounsley S., Sankoff D., Giuliano G., Albert V.A., Wincker P.,
RA Lashermes P.;
RT "The coffee genome provides insight into the convergent evolution of
RT caffeine biosynthesis.";
RL Science 345:1181-1184(2014).
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DR EMBL; HG739429; CDP19096.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A068VEE5; -.
DR STRING; 49390.A0A068VEE5; -.
DR EnsemblPlants; CDP19096; CDP19096; GSCOC_T00008192001.
DR Gramene; CDP19096; CDP19096; GSCOC_T00008192001.
DR InParanoid; A0A068VEE5; -.
DR OMA; RANHEES; -.
DR PhylomeDB; A0A068VEE5; -.
DR Proteomes; UP000295252; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR InterPro; IPR044648; JJJ1_plant.
DR InterPro; IPR003604; Matrin/U1-like-C_Znf_C2H2.
DR InterPro; IPR022755; Znf_C2H2_jaz.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR45495; DNAJ PROTEIN JJJ1 HOMOLOG; 1.
DR PANTHER; PTHR45495:SF1; DNAJ PROTEIN JJJ1 HOMOLOG; 1.
DR Pfam; PF12171; zf-C2H2_jaz; 1.
DR SMART; SM00355; ZnF_C2H2; 2.
DR SMART; SM00451; ZnF_U1; 1.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 2.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000295252};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00042}.
FT DOMAIN 447..476
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT REGION 204..477
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 65..136
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 206..242
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 243..297
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 312..326
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 354..382
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 394..412
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 443..477
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 477 AA; 55245 MW; D74ABF399862728A CRC64;
MFRTCFRISP IPLGLGFPKE APLLVGHMFD SVTAFYNYWL GFVTLMDFCW VDQYDVMAGP
NRKSRRVMEE ENKKLRKKAR REYNDTVRGL AEFVKKRDKR VIDMQMKRSE EVERRKEEER
ERKKELERQK AERAKKYEEP EWAKVEDIED EDTEEIVDDD KKKKGDGKEL YCVACGKKFK
SDKQWKNHEQ SKKHKEKVAE LRNTFIEEDE EYEEGKTEEV GEEYDEEDEV GAEESGFLSA
DDEVDELMDH FNSTMEIREE GNDEAQSSEQ DGLVDRDSGI GLKELQSDMR SDDDEASNLE
AMVSGQKNRK NGSLDQKPKR ASNKIPVKVD SNEMDFMAYN NMKGSRRNRG GRKQRGRTLE
EAAQTEIAEA HVEAENNGYH DTMKEASSDS FLETQSRGKE DDESETSHKL SRQAVNKKGT
AKSDSNFKSK EAPKGRKKKA NTKVISNRCE KCGEEFESRN KLHRHLGDTG HATLKSR
//
