ID A0A068VES0_COFCA Unreviewed; 690 AA.
AC A0A068VES0;
DT 01-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE SubName: Full=DH200=94 genomic scaffold, scaffold_345 {ECO:0000313|EMBL:CDP19097.1};
GN ORFNames=GSCOC_T00008194001 {ECO:0000313|EMBL:CDP19097.1};
OS Coffea canephora (Robusta coffee).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex;
OC Bertiereae - Coffeeae clade; Coffeeae; Coffea.
OX NCBI_TaxID=49390 {ECO:0000313|EMBL:CDP19097.1, ECO:0000313|Proteomes:UP000295252};
RN [1] {ECO:0000313|Proteomes:UP000295252}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DH200-94 {ECO:0000313|Proteomes:UP000295252};
RX PubMed=25190796; DOI=10.1126/science.1255274;
RA Denoeud F., Carretero-Paulet L., Dereeper A., Droc G., Guyot R.,
RA Pietrella M., Zheng C., Alberti A., Anthony F., Aprea G., Aury J.M.,
RA Bento P., Bernard M., Bocs S., Campa C., Cenci A., Combes M.C.,
RA Crouzillat D., Da Silva C., Daddiego L., De Bellis F., Dussert S.,
RA Garsmeur O., Gayraud T., Guignon V., Jahn K., Jamilloux V., Joet T.,
RA Labadie K., Lan T., Leclercq J., Lepelley M., Leroy T., Li L.T.,
RA Librado P., Lopez L., Munoz A., Noel B., Pallavicini A., Perrotta G.,
RA Poncet V., Pot D., Priyono X., Rigoreau M., Rouard M., Rozas J.,
RA Tranchant-Dubreuil C., VanBuren R., Zhang Q., Andrade A.C., Argout X.,
RA Bertrand B., de Kochko A., Graziosi G., Henry R.J., Jayarama X., Ming R.,
RA Nagai C., Rounsley S., Sankoff D., Giuliano G., Albert V.A., Wincker P.,
RA Lashermes P.;
RT "The coffee genome provides insight into the convergent evolution of
RT caffeine biosynthesis.";
RL Science 345:1181-1184(2014).
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000256|ARBA:ARBA00001947};
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DR EMBL; HG739429; CDP19097.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A068VES0; -.
DR STRING; 49390.A0A068VES0; -.
DR EnsemblPlants; CDP19097; CDP19097; GSCOC_T00008194001.
DR Gramene; CDP19097; CDP19097; GSCOC_T00008194001.
DR InParanoid; A0A068VES0; -.
DR OMA; FYPAEGD; -.
DR PhylomeDB; A0A068VES0; -.
DR Proteomes; UP000295252; Unassembled WGS sequence.
DR GO; GO:0004407; F:histone deacetylase activity; IEA:UniProtKB-EC.
DR Gene3D; 3.10.490.10; Gamma-glutamyl cyclotransferase-like; 1.
DR Gene3D; 3.40.800.20; Histone deacetylase domain; 1.
DR InterPro; IPR000286; His_deacetylse.
DR InterPro; IPR023801; His_deacetylse_dom.
DR InterPro; IPR037138; His_deacetylse_dom_sf.
DR InterPro; IPR023696; Ureohydrolase_dom_sf.
DR PANTHER; PTHR10625:SF37; HISTONE DEACETYLASE 18-RELATED; 1.
DR PANTHER; PTHR10625; HISTONE DEACETYLASE HDAC1-RELATED; 1.
DR Pfam; PF00850; Hist_deacetyl; 1.
DR PRINTS; PR01270; HDASUPER.
DR SUPFAM; SSF52768; Arginase/deacetylase; 1.
PE 4: Predicted;
KW Chromatin regulator {ECO:0000256|ARBA:ARBA00022853};
KW Reference proteome {ECO:0000313|Proteomes:UP000295252};
KW Repressor {ECO:0000256|ARBA:ARBA00022491};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 36..336
FT /note="Histone deacetylase"
FT /evidence="ECO:0000259|Pfam:PF00850"
SQ SEQUENCE 690 AA; 76942 MW; C39E15E6CBDABD48 CRC64;
MDSSKTASDG VLLPERRRVG LLYDERMCKH FDATDHPENP NRILAIWNKL ESFGIHQRCV
ILNAKEADDK HIALVHTRSH VDFIKNISSQ KFGSKWDRIA ARFNSIYFNE GSSEAAYLAA
GSVVEVAEKV AKGELDSAFA IVRPPGHHAE ANEPMGFCLY NNVAIATSFL LNERTELGIK
KILVVDWDVH HGNGTQKMFY KDSRVLFFSV HRHEFGCFYP GGDDGSYVMI GEGPGAGYNI
NVPWENRSCG DADYLAVWDH ILIPVAKAFD PDMVIISAGF DAAVNDPLGG CCVSPYGYSI
MLSKLMEFAE GKIVMALEGG YNLKSLANSA LACIQVLLGD KPIVRSLQAD PFESTWRVLE
AVREALSAFW PILAKKLPEE LTSKRTSLIL IPCSDSEDEY DNGPNTTSED YEAAIEHVIE
PLQNLEVDDG HGTELTNGPN TTSEDYEVAI EHVIEPLQNL KVENGHDQAI AFSSSWRSEL
SKIDIWYATY GSNMRESRFL CYIEGGQVEG MQKQCVGSVD KSPPKESCWR TFPHRLFFAR
DYTATWGPGG VAFLHPESNS EDKAYLRLYR ITLEQFNDVL VQENILSSRT GPLFGLKDLQ
SIEDKKCISI EAIKRGWYHN VLYLGKEDNL PVITMTCTLY SVDNFKSGKF PMCAPGRGYA
NTLIKGLVEG NRLSNEEAVA YIEEASTKKL
//
