ID A0A068VIK6_COFCA Unreviewed; 236 AA.
AC A0A068VIK6;
DT 01-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE RecName: Full=MSP domain-containing protein {ECO:0000259|PROSITE:PS50202};
GN ORFNames=GSCOC_T00002336001 {ECO:0000313|EMBL:CDP19508.1};
OS Coffea canephora (Robusta coffee).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex;
OC Bertiereae - Coffeeae clade; Coffeeae; Coffea.
OX NCBI_TaxID=49390 {ECO:0000313|EMBL:CDP19508.1, ECO:0000313|Proteomes:UP000295252};
RN [1] {ECO:0000313|Proteomes:UP000295252}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DH200-94 {ECO:0000313|Proteomes:UP000295252};
RX PubMed=25190796; DOI=10.1126/science.1255274;
RA Denoeud F., Carretero-Paulet L., Dereeper A., Droc G., Guyot R.,
RA Pietrella M., Zheng C., Alberti A., Anthony F., Aprea G., Aury J.M.,
RA Bento P., Bernard M., Bocs S., Campa C., Cenci A., Combes M.C.,
RA Crouzillat D., Da Silva C., Daddiego L., De Bellis F., Dussert S.,
RA Garsmeur O., Gayraud T., Guignon V., Jahn K., Jamilloux V., Joet T.,
RA Labadie K., Lan T., Leclercq J., Lepelley M., Leroy T., Li L.T.,
RA Librado P., Lopez L., Munoz A., Noel B., Pallavicini A., Perrotta G.,
RA Poncet V., Pot D., Priyono X., Rigoreau M., Rouard M., Rozas J.,
RA Tranchant-Dubreuil C., VanBuren R., Zhang Q., Andrade A.C., Argout X.,
RA Bertrand B., de Kochko A., Graziosi G., Henry R.J., Jayarama X., Ming R.,
RA Nagai C., Rounsley S., Sankoff D., Giuliano G., Albert V.A., Wincker P.,
RA Lashermes P.;
RT "The coffee genome provides insight into the convergent evolution of
RT caffeine biosynthesis.";
RL Science 345:1181-1184(2014).
CC -!- SIMILARITY: Belongs to the VAMP-associated protein (VAP) (TC 9.B.17)
CC family. {ECO:0000256|ARBA:ARBA00008932}.
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DR EMBL; HG739608; CDP19508.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A068VIK6; -.
DR STRING; 49390.A0A068VIK6; -.
DR EnsemblPlants; CDP19508; CDP19508; GSCOC_T00002336001.
DR Gramene; CDP19508; CDP19508; GSCOC_T00002336001.
DR InParanoid; A0A068VIK6; -.
DR OMA; TMQAHKE; -.
DR PhylomeDB; A0A068VIK6; -.
DR Proteomes; UP000295252; Chromosome 2.
DR GO; GO:0005789; C:endoplasmic reticulum membrane; IEA:InterPro.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR000535; MSP_dom.
DR InterPro; IPR008962; PapD-like_sf.
DR InterPro; IPR016763; VAP.
DR PANTHER; PTHR10809; VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN; 1.
DR PANTHER; PTHR10809:SF164; VESICLE-ASSOCIATED PROTEIN 1-3; 1.
DR Pfam; PF00635; Motile_Sperm; 1.
DR PIRSF; PIRSF019693; VAMP-associated; 1.
DR SUPFAM; SSF49354; PapD-like; 1.
DR PROSITE; PS50202; MSP; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils}; Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000295252};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 213..235
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 9..127
FT /note="MSP"
FT /evidence="ECO:0000259|PROSITE:PS50202"
FT REGION 128..177
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 180..207
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 236 AA; 26378 MW; 0CE5259CFA1B5AE0 CRC64;
MGISGPGDFL SIHPTELKFP FELRKQSSCS LQLTNRTDQY IAFKVKTTNP RKYSVRPNAG
VIRPGAISNV TVTMQAHKEM PPDMQCKDKF LVQSVVMPEG AKELNQQMFE KEDGKVIGES
KLRVAYIPAN PPSPVPEEPE EDSSPISSMI DDEVKSSEHV SRTFEESTGG ASSSEDWPMI
SKLMEEKTSA TQQNQKLYLE LEKTRKEILR NQVGRVSLFI ALLIGLVGVL IGYFIR
//
