ID A0A068VJL2_COFCA Unreviewed; 286 AA.
AC A0A068VJL2;
DT 01-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE SubName: Full=DH200=94 genomic scaffold, scaffold_1677 {ECO:0000313|EMBL:CDP20749.1};
GN ORFNames=GSCOC_T00009603001 {ECO:0000313|EMBL:CDP20749.1};
OS Coffea canephora (Robusta coffee).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex;
OC Bertiereae - Coffeeae clade; Coffeeae; Coffea.
OX NCBI_TaxID=49390 {ECO:0000313|EMBL:CDP20749.1, ECO:0000313|Proteomes:UP000295252};
RN [1] {ECO:0000313|Proteomes:UP000295252}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DH200-94 {ECO:0000313|Proteomes:UP000295252};
RX PubMed=25190796; DOI=10.1126/science.1255274;
RA Denoeud F., Carretero-Paulet L., Dereeper A., Droc G., Guyot R.,
RA Pietrella M., Zheng C., Alberti A., Anthony F., Aprea G., Aury J.M.,
RA Bento P., Bernard M., Bocs S., Campa C., Cenci A., Combes M.C.,
RA Crouzillat D., Da Silva C., Daddiego L., De Bellis F., Dussert S.,
RA Garsmeur O., Gayraud T., Guignon V., Jahn K., Jamilloux V., Joet T.,
RA Labadie K., Lan T., Leclercq J., Lepelley M., Leroy T., Li L.T.,
RA Librado P., Lopez L., Munoz A., Noel B., Pallavicini A., Perrotta G.,
RA Poncet V., Pot D., Priyono X., Rigoreau M., Rouard M., Rozas J.,
RA Tranchant-Dubreuil C., VanBuren R., Zhang Q., Andrade A.C., Argout X.,
RA Bertrand B., de Kochko A., Graziosi G., Henry R.J., Jayarama X., Ming R.,
RA Nagai C., Rounsley S., Sankoff D., Giuliano G., Albert V.A., Wincker P.,
RA Lashermes P.;
RT "The coffee genome provides insight into the convergent evolution of
RT caffeine biosynthesis.";
RL Science 345:1181-1184(2014).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; HG740761; CDP20749.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A068VJL2; -.
DR STRING; 49390.A0A068VJL2; -.
DR EnsemblPlants; CDP20749; CDP20749; GSCOC_T00009603001.
DR Gramene; CDP20749; CDP20749; GSCOC_T00009603001.
DR InParanoid; A0A068VJL2; -.
DR OMA; LNWFEDI; -.
DR PhylomeDB; A0A068VJL2; -.
DR Proteomes; UP000295252; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR CDD; cd00167; SANT; 2.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR InterPro; IPR044676; EOBI/EOBII-like_plant.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017930; Myb_dom.
DR InterPro; IPR001005; SANT/Myb.
DR PANTHER; PTHR45675:SF1; MYB TRANSCRIPTION FACTOR-RELATED; 1.
DR PANTHER; PTHR45675; MYB TRANSCRIPTION FACTOR-RELATED-RELATED; 1.
DR Pfam; PF00249; Myb_DNA-binding; 2.
DR SMART; SM00717; SANT; 2.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS51294; HTH_MYB; 2.
DR PROSITE; PS50090; MYB_LIKE; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000295252}.
FT DOMAIN 2..58
FT /note="HTH myb-type"
FT /evidence="ECO:0000259|PROSITE:PS51294"
FT DOMAIN 2..54
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT DOMAIN 55..105
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT DOMAIN 59..109
FT /note="HTH myb-type"
FT /evidence="ECO:0000259|PROSITE:PS51294"
SQ SEQUENCE 286 AA; 32663 MW; D8593646EB7EBAF0 CRC64;
MMMDLRRGPW TVEEDFTLIN YIAHHGEGRW NSLARCAGLK RTGKSCRLRW LNYLRPDVRR
GNITLEEQLL ILELHSRWGN RWSKIAQHLP GRTDNEIKNY WRTRVQKHAK QLKCDVNSKQ
FKDTMRYLWM PRLVERIQAA AAAGANSSTA ARATAATATT TSNSNYHQGN TSMVADVGSG
GQVILPQAST YGGHSFTAQF SPVSDLTDCY NYPVKQSNNQ DYYQANNQLS YGETLTSPTG
YFNQALDFHL MEQNNAWMDG GDVSDNLWND EDAWFFQQQL NSNTFN
//
