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Database: UniProt
Entry: A0A072TF69_MEDTR
LinkDB: A0A072TF69_MEDTR
Original site: A0A072TF69_MEDTR 
ID   A0A072TF69_MEDTR        Unreviewed;       346 AA.
AC   A0A072TF69;
DT   01-OCT-2014, integrated into UniProtKB/TrEMBL.
DT   01-OCT-2014, sequence version 1.
DT   24-JAN-2024, entry version 47.
DE   SubName: Full=Ubiquitin carboxyl-terminal hydrolase {ECO:0000313|EMBL:KEH16199.1};
GN   Name=25480797 {ECO:0000313|EnsemblPlants:KEH16199};
GN   ORFNames=MTR_0279s0020 {ECO:0000313|EMBL:KEH16199.1};
OS   Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC   NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX   NCBI_TaxID=3880 {ECO:0000313|EMBL:KEH16199.1};
RN   [1] {ECO:0000313|EMBL:KEH16199.1, ECO:0000313|EnsemblPlants:KEH16199}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=A17 {ECO:0000313|EMBL:KEH16199.1}, and cv. Jemalong A17
RC   {ECO:0000313|EnsemblPlants:KEH16199};
RX   PubMed=22089132; DOI=10.1038/nature10625;
RA   Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA   Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA   Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA   Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA   Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA   Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA   Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA   Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA   Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA   Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA   Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA   Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA   Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA   Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA   Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA   Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA   Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA   Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA   Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA   Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA   Town C.D., Roe B.A.;
RT   "The Medicago genome provides insight into the evolution of rhizobial
RT   symbioses.";
RL   Nature 480:520-524(2011).
RN   [2] {ECO:0000313|EMBL:KEH16199.1, ECO:0000313|EnsemblPlants:KEH16199}
RP   GENOME REANNOTATION.
RC   STRAIN=A17 {ECO:0000313|EMBL:KEH16199.1}, and cv. Jemalong A17
RC   {ECO:0000313|EnsemblPlants:KEH16199};
RX   PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA   Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA   Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA   Schwartz D.C., Town C.D.;
RT   "An improved genome release (version Mt4.0) for the model legume Medicago
RT   truncatula.";
RL   BMC Genomics 15:312-312(2014).
RN   [3] {ECO:0000313|EnsemblPlants:KEH16199}
RP   IDENTIFICATION.
RC   STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:KEH16199};
RG   EnsemblPlants;
RL   Submitted (JUN-2015) to UniProtKB.
CC   -!- SIMILARITY: Belongs to the peptidase C19 family.
CC       {ECO:0000256|ARBA:ARBA00009085}.
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DR   EMBL; KL403004; KEH16199.1; -; Genomic_DNA.
DR   RefSeq; XP_013442174.1; XM_013586720.1.
DR   STRING; 3880.A0A072TF69; -.
DR   PaxDb; 3880-AES91301; -.
DR   EnsemblPlants; KEH16199; KEH16199; MTR_0279s0020.
DR   Gramene; KEH16199; KEH16199; MTR_0279s0020.
DR   eggNOG; KOG1865; Eukaryota.
DR   OMA; DNCDIHT; -.
DR   GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0004843; F:cysteine-type deubiquitinase activity; IBA:GO_Central.
DR   Gene3D; 3.90.70.10; Cysteine proteinases; 1.
DR   InterPro; IPR038765; Papain-like_cys_pep_sf.
DR   InterPro; IPR001394; Peptidase_C19_UCH.
DR   InterPro; IPR018200; USP_CS.
DR   InterPro; IPR028889; USP_dom.
DR   PANTHER; PTHR24006; UBIQUITIN CARBOXYL-TERMINAL HYDROLASE; 1.
DR   PANTHER; PTHR24006:SF747; UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 20; 1.
DR   Pfam; PF00443; UCH; 1.
DR   SUPFAM; SSF54001; Cysteine proteinases; 1.
DR   PROSITE; PS00973; USP_2; 1.
DR   PROSITE; PS50235; USP_3; 1.
PE   3: Inferred from homology;
KW   Hydrolase {ECO:0000313|EMBL:KEH16199.1}.
FT   DOMAIN          5..293
FT                   /note="USP"
FT                   /evidence="ECO:0000259|PROSITE:PS50235"
FT   REGION          297..316
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   346 AA;  40161 MW;  97307B3126183938 CRC64;
     MILEAGIRNM HNSCFMNAIF QAFIHTPHLY HGLGNFQHRP CSHNGFCFMC AFQDLFIEAL
     SPSRSIVIPS KLFENLKRFR STFVKGHHED PHEFMQSALY HLRKYFPNFN NLINQIFGVV
     FVNKLQCHCG CFADDKFGTE FELSLNITVP DRIENIQMAL NNYFEKVRVK RYCSFCKKYN
     FSDKWLLLTE PPLVAIIHLK RFGNNEWKIA KPVSFSMELD LKPYSTGSDN VSWKYDLYAM
     VHHKGDVIAE GHFVCYVRSD TGQWYLMDDA VVIKADEAEV LSKEAYLLFY LRKDGSHDKP
     KKETNSKPKE KENYFGSDTP IDLSNWLSLL ASSQGSSDYA VVWFIS
//
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