ID A0A072TY89_MEDTR Unreviewed; 641 AA.
AC A0A072TY89;
DT 01-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE SubName: Full=ARID/bright DNA-binding domain protein {ECO:0000313|EMBL:KEH18515.1};
GN Name=11445678 {ECO:0000313|EnsemblPlants:KEH18515};
GN OrderedLocusNames=MTR_8g022980 {ECO:0000313|EMBL:KEH18515.1};
OS Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX NCBI_TaxID=3880 {ECO:0000313|EMBL:KEH18515.1, ECO:0000313|Proteomes:UP000002051};
RN [1] {ECO:0000313|EMBL:KEH18515.1, ECO:0000313|Proteomes:UP000002051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A17 {ECO:0000313|EMBL:KEH18515.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:KEH18515,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=22089132; DOI=10.1038/nature10625;
RA Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA Town C.D., Roe B.A.;
RT "The Medicago genome provides insight into the evolution of rhizobial
RT symbioses.";
RL Nature 480:520-524(2011).
RN [2] {ECO:0000313|EMBL:KEH18515.1, ECO:0000313|Proteomes:UP000002051}
RP GENOME REANNOTATION.
RC STRAIN=A17 {ECO:0000313|EMBL:KEH18515.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:KEH18515,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA Schwartz D.C., Town C.D.;
RT "An improved genome release (version Mt4.0) for the model legume Medicago
RT truncatula.";
RL BMC Genomics 15:312-312(2014).
RN [3] {ECO:0000313|EnsemblPlants:KEH18515}
RP IDENTIFICATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:KEH18515};
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
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DR EMBL; CM001224; KEH18515.1; -; Genomic_DNA.
DR RefSeq; XP_013444490.1; XM_013589036.1.
DR AlphaFoldDB; A0A072TY89; -.
DR EnsemblPlants; KEH18515; KEH18515; MTR_8g022980.
DR Gramene; KEH18515; KEH18515; MTR_8g022980.
DR Proteomes; UP000002051; Chromosome 8.
DR ExpressionAtlas; A0A072TY89; differential.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd16100; ARID; 1.
DR CDD; cd15615; PHD_ARID4_like; 1.
DR Gene3D; 1.10.150.60; ARID DNA-binding domain; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR042293; ARID4.
DR InterPro; IPR001606; ARID_dom.
DR InterPro; IPR036431; ARID_dom_sf.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46694; AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4; 1.
DR PANTHER; PTHR46694:SF1; AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4; 1.
DR Pfam; PF01388; ARID; 1.
DR SMART; SM01014; ARID; 1.
DR SMART; SM00501; BRIGHT; 1.
DR SUPFAM; SSF46774; ARID-like; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR PROSITE; PS51011; ARID; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000313|EMBL:KEH18515.1};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000002051};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 455..559
FT /note="ARID"
FT /evidence="ECO:0000259|PROSITE:PS51011"
FT REGION 84..104
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 324..353
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 641 AA; 70818 MW; 6DB19CC2F3B67050 CRC64;
MQGIPYVVFW KNAFSQYAAC HFRQALFSVV QSSSTHTWDA FHLARASFEL YCVQNNQVLP
TDSNDADSDM GPHLLGECLK INVDPPEMDE EDDDEESSSG SLPSIQIHDD EVNLRFLICG
APSTVDESLL RSLEDGLRAL LTIEMRSCKL HGKYSAPPPP LQAASFSRGV VTMRCDISTC
SSAHISLLVS GSPQACFNDQ LLENHIKNEI IEKSQIVHAR LNGEANTQII SEPRRSASIA
CGATIFEVSM KLPQWALQIL RQLAPDVSYR SLVALGIASI QGLPVASFEK DDAERLLFFY
QSSAKDGCDN GNIVFSRPPV WLKPPPPTRK RCESSQGASP DIHNDEEEKD RKMVNGISTP
LTPARQRLKV SAMRPIPHVR RHRMTPFSGP SGVNGFGGPH VEAYVPLVPV KRSSIGSSSA
TQRKSFSSSS QPKQVISLNP LPLKKHGCSR GSVQTCSEEE FIKDVMEFLI LRGHSRLIPQ
GGLAEFPDAI LNGKRLDLYN LYKEVVTRGG FHVGNGINWK GQIFSKMGNY TSTNRMTGVG
NTLKRHYETY LLEYELAHDD VDGECCLLCH SSAAGDWVNC GICGEWAHFG CDRRQGLGAF
KDYAKTDGLE YICPHCSVTN FKKKQSVANG YSQRSMSSRL L
//
