ID A0A072UJK5_MEDTR Unreviewed; 464 AA.
AC A0A072UJK5;
DT 01-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE SubName: Full=F-box/RNI/FBD-like domain protein {ECO:0000313|EMBL:KEH29909.1};
DE SubName: Full=Putative F-box domain, FBD domain, leucine-rich repeat domain, L domain-containing protein {ECO:0000313|EMBL:RHN60586.1};
GN Name=25492328 {ECO:0000313|EnsemblPlants:KEH29909};
GN OrderedLocusNames=MTR_4g056030 {ECO:0000313|EMBL:KEH29909.1};
GN ORFNames=MtrunA17_Chr4g0027441 {ECO:0000313|EMBL:RHN60586.1};
OS Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX NCBI_TaxID=3880 {ECO:0000313|EMBL:KEH29909.1, ECO:0000313|Proteomes:UP000002051};
RN [1] {ECO:0000313|EMBL:KEH29909.1, ECO:0000313|Proteomes:UP000002051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A17 {ECO:0000313|EMBL:KEH29909.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:KEH29909,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=22089132; DOI=10.1038/nature10625;
RA Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA Town C.D., Roe B.A.;
RT "The Medicago genome provides insight into the evolution of rhizobial
RT symbioses.";
RL Nature 480:520-524(2011).
RN [2] {ECO:0000313|EMBL:KEH29909.1, ECO:0000313|Proteomes:UP000002051}
RP GENOME REANNOTATION.
RC STRAIN=A17 {ECO:0000313|EMBL:KEH29909.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:KEH29909,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA Schwartz D.C., Town C.D.;
RT "An improved genome release (version Mt4.0) for the model legume Medicago
RT truncatula.";
RL BMC Genomics 15:312-312(2014).
RN [3] {ECO:0000313|EnsemblPlants:KEH29909}
RP IDENTIFICATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:KEH29909};
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
RN [4] {ECO:0000313|EMBL:RHN60586.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:RHN60586.1};
RA Pecrix Y., Gamas P., Carrere S.;
RT "Whole-genome landscape of Medicago truncatula symbiotic genes.";
RL Nat. Plants 0:0-0(2018).
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DR EMBL; CM001220; KEH29909.1; -; Genomic_DNA.
DR EMBL; PSQE01000004; RHN60586.1; -; Genomic_DNA.
DR RefSeq; XP_013455878.1; XM_013600424.1.
DR AlphaFoldDB; A0A072UJK5; -.
DR STRING; 3880.A0A072UJK5; -.
DR PaxDb; 3880-AES88489; -.
DR EnsemblPlants; KEH29909; KEH29909; MTR_4g056030.
DR GeneID; 25492328; -.
DR Gramene; KEH29909; KEH29909; MTR_4g056030.
DR KEGG; mtr:25492328; -.
DR HOGENOM; CLU_010721_1_2_1; -.
DR OrthoDB; 908332at2759; -.
DR Proteomes; UP000002051; Chromosome 4.
DR Proteomes; UP000265566; Chromosome 4.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006566; FBD.
DR InterPro; IPR032675; LRR_dom_sf.
DR PANTHER; PTHR31900; F-BOX/RNI SUPERFAMILY PROTEIN-RELATED; 1.
DR PANTHER; PTHR31900:SF15; RNI-LIKE SUPERFAMILY PROTEIN; 1.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08387; FBD; 1.
DR SUPFAM; SSF81383; F-box domain; 1.
DR SUPFAM; SSF52047; RNI-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000002051}.
FT DOMAIN 11..50
FT /note="F-box"
FT /evidence="ECO:0000259|Pfam:PF00646"
FT DOMAIN 370..411
FT /note="FBD"
FT /evidence="ECO:0000259|Pfam:PF08387"
SQ SEQUENCE 464 AA; 53232 MW; D69DA8BA0FB083D4 CRC64;
MTCSDEQHDR LSNLSDDLIC HILSFLSTKE CYRTCVLSTR WESICTKIPN LHFQLPENSD
PVLSKEIKFV NVALLRRTEN IRKLSLNSEN GCQPHDVRMW VSKALDLKVQ ELELDLFLHE
KILLPLRLST CESLVVLKLQ GRIQPKLNSS FHVYLPSLKI LHLRETVAYS IFDDRTEYAL
NNFLSGCPHL EELNLAGTFA LPINTSFYLL KRLFLCLYIP TSVVKCFPLQ INAPSLEVLY
LVDFSLAPRK YDFTNLSNLD EAAIFICNPA DFNNLYTVLK GLSKVESLAL GSNTFHFLGM
EAKLDNLHLL TFHNLLFLSV EIYENCSWNM LVSFLHNAPK LKHLAVGRKI EINSRRKEVG
NSSWVEPLIS PACLTNSLIS FEFVGIQNIK TELDFTRYIV SHSSKLEKVK IFTPTSKKRR
VEKSLRKGSK KSSVLVWDIN SVEDQLDAFK DIKDLFSELF LHNK
//
