ID A0A072UNK6_MEDTR Unreviewed; 988 AA.
AC A0A072UNK6;
DT 01-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE RecName: Full=Starch synthase, chloroplastic/amyloplastic {ECO:0000256|RuleBase:RU361232};
DE EC=2.4.1.- {ECO:0000256|RuleBase:RU361232};
GN OrderedLocusNames=MTR_4g094595 {ECO:0000313|EMBL:KEH31364.1};
OS Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX NCBI_TaxID=3880 {ECO:0000313|EMBL:KEH31364.1, ECO:0000313|Proteomes:UP000002051};
RN [1] {ECO:0000313|EMBL:KEH31364.1, ECO:0000313|Proteomes:UP000002051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A17 {ECO:0000313|EMBL:KEH31364.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:KEH31364,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=22089132; DOI=10.1038/nature10625;
RA Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA Town C.D., Roe B.A.;
RT "The Medicago genome provides insight into the evolution of rhizobial
RT symbioses.";
RL Nature 480:520-524(2011).
RN [2] {ECO:0000313|EMBL:KEH31364.1, ECO:0000313|Proteomes:UP000002051}
RP GENOME REANNOTATION.
RC STRAIN=A17 {ECO:0000313|EMBL:KEH31364.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:KEH31364,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA Schwartz D.C., Town C.D.;
RT "An improved genome release (version Mt4.0) for the model legume Medicago
RT truncatula.";
RL BMC Genomics 15:312-312(2014).
RN [3] {ECO:0000313|EnsemblPlants:KEH31364}
RP IDENTIFICATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:KEH31364};
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
CC -!- PATHWAY: Glycan biosynthesis; starch biosynthesis.
CC {ECO:0000256|ARBA:ARBA00004727, ECO:0000256|RuleBase:RU361232}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast
CC {ECO:0000256|RuleBase:RU361232}. Plastid, amyloplast
CC {ECO:0000256|RuleBase:RU361232}.
CC -!- SIMILARITY: Belongs to the glycosyltransferase 1 family.
CC Bacterial/plant glycogen synthase subfamily.
CC {ECO:0000256|ARBA:ARBA00010281, ECO:0000256|RuleBase:RU361232}.
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DR EMBL; CM001220; KEH31364.1; -; Genomic_DNA.
DR RefSeq; XP_013457333.1; XM_013601879.1.
DR AlphaFoldDB; A0A072UNK6; -.
DR STRING; 3880.A0A072UNK6; -.
DR EnsemblPlants; KEH31364; KEH31364; MTR_4g094595.
DR Gramene; KEH31364; KEH31364; MTR_4g094595.
DR HOGENOM; CLU_007243_0_0_1; -.
DR UniPathway; UPA00152; -.
DR Proteomes; UP000002051; Chromosome 4.
DR GO; GO:0009501; C:amyloplast; IEA:UniProtKB-SubCell.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0004373; F:glycogen (starch) synthase activity; IEA:InterPro.
DR GO; GO:0019252; P:starch biosynthetic process; IEA:UniProtKB-UniRule.
DR CDD; cd03791; GT5_Glycogen_synthase_DULL1-like; 1.
DR Gene3D; 3.40.50.2000; Glycogen Phosphorylase B; 2.
DR HAMAP; MF_00484; Glycogen_synth; 1.
DR InterPro; IPR001296; Glyco_trans_1.
DR InterPro; IPR011835; GS/SS.
DR InterPro; IPR013534; Starch_synth_cat_dom.
DR NCBIfam; TIGR02095; glgA; 1.
DR PANTHER; PTHR46083; -; 1.
DR PANTHER; PTHR46083:SF2; STARCH SYNTHASE 4, CHLOROPLASTIC_AMYLOPLASTIC-RELATED; 1.
DR Pfam; PF08323; Glyco_transf_5; 1.
DR Pfam; PF00534; Glycos_transf_1; 1.
DR SUPFAM; SSF53756; UDP-Glycosyltransferase/glycogen phosphorylase; 1.
PE 3: Inferred from homology;
KW Amyloplast {ECO:0000256|RuleBase:RU361232};
KW Chloroplast {ECO:0000256|RuleBase:RU361232};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Glycosyltransferase {ECO:0000256|ARBA:ARBA00022676,
KW ECO:0000256|RuleBase:RU361232}; Plastid {ECO:0000256|RuleBase:RU361232};
KW Reference proteome {ECO:0000313|Proteomes:UP000002051};
KW Starch biosynthesis {ECO:0000256|ARBA:ARBA00022922,
KW ECO:0000256|RuleBase:RU361232};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 493..732
FT /note="Starch synthase catalytic"
FT /evidence="ECO:0000259|Pfam:PF08323"
FT DOMAIN 787..907
FT /note="Glycosyl transferase family 1"
FT /evidence="ECO:0000259|Pfam:PF00534"
FT REGION 51..99
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 144..407
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 51..80
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 988 AA; 111572 MW; 95B3310CDA3D4D23 CRC64;
MASKLATCFV CCNLSSGFNN CNNNYNQPTR RVMCSPFPSS CKIRHLRILS SQQQKRQYHK
KTSSSSSSSS QPSSIDGGRT IDPKSNHDHS PHNSTPSALN VNGAEQAEQL SGGQLEDLLS
MIKNAEKSKI FFWSTYILLI NQARVRALED LQKVLAEKKA LQAEVNDLEM RLAETDARIE
VADQEKTHVE LMEGQLEKLR NELAEKGSTE ESNAELHDLH NDRIHSLTEE LNSVREENAS
LKNAIESFKI QLNDVKNNDE RLVVLEKERL YLESTLKDLE SKLSISPEDV SELSTLRVEC
KHLSDKVENL QLLLDKATEQ ANQAVIVLEE NQDLQRKVDK LETSLEEANV YKLSSDKLLK
YNELMQQKIK LLENSLQKSD EDINSYIQLY QQSVNEFQDT LDILKKESKR KTLDEPVEDM
PWEFWSQLLL LIDGWTLEKK IAVDDAKLLR EKVWKKDKSI SDVYMACKGQ NEDGAISAFL
GLTSSATSPG LYVIHIAAEM APVAKVGGLG DVVCGLSKAL QKKGHLVEIV LPKYDCMQYD
RIGDLRALDV VIESYFDGQL FKNKIWVGTV EGLPVYFIEP HHPDKFFWRG DFYGERDDFR
RFSYFSRVAL EFLLQAGKKP DIIHCHDWQT AFVAPLYWDI YAPKGLNSAR ICFTCHNFEY
QGTAAASELE SCGLDSHHLN RPDRMQDNSA HDRVNSVKGG VVYSNIVTTV SPTYAQEVRT
AEGGKGLHST LSTHSKKFIG VLNGIDTDIW NPATDPFLEV QYSANDLQGK AENKEALRKN
LGLSSADVKR PLVGCITRLV PQKGVHLIRH AIYLTLELGG QFVLLGSSPV PHIQREFEGI
ANHFKNHDNI RLILKYDESL SHTIYAASDM FIIPSIFEPC GLTQMISMRY GAVPIARKTG
GLNDSVFDID DDTIPSQFRN GFTFLNADEK GIDGALVRAI NLFRDDPESW KQLVQKDMNI
DFSWDSSAAQ YEELYLKSVT RGRAVKRT
//
