ID A0A072V679_MEDTR Unreviewed; 631 AA.
AC A0A072V679;
DT 01-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2014, sequence version 1.
DT 24-JAN-2024, entry version 41.
DE SubName: Full=Putative Zinc finger, MYND-type {ECO:0000313|EMBL:RHN72488.1};
DE SubName: Full=Zinc finger MYND domain protein {ECO:0000313|EMBL:KEH36833.1};
GN Name=25486135 {ECO:0000313|EnsemblPlants:KEH36833};
GN OrderedLocusNames=MTR_2g022910 {ECO:0000313|EMBL:KEH36833.1};
GN ORFNames=MtrunA17_Chr2g0288221 {ECO:0000313|EMBL:RHN72488.1};
OS Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX NCBI_TaxID=3880 {ECO:0000313|EMBL:KEH36833.1, ECO:0000313|Proteomes:UP000002051};
RN [1] {ECO:0000313|EMBL:KEH36833.1, ECO:0000313|Proteomes:UP000002051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A17 {ECO:0000313|EMBL:KEH36833.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:KEH36833,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=22089132; DOI=10.1038/nature10625;
RA Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA Town C.D., Roe B.A.;
RT "The Medicago genome provides insight into the evolution of rhizobial
RT symbioses.";
RL Nature 480:520-524(2011).
RN [2] {ECO:0000313|EMBL:KEH36833.1, ECO:0000313|Proteomes:UP000002051}
RP GENOME REANNOTATION.
RC STRAIN=A17 {ECO:0000313|EMBL:KEH36833.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:KEH36833,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA Schwartz D.C., Town C.D.;
RT "An improved genome release (version Mt4.0) for the model legume Medicago
RT truncatula.";
RL BMC Genomics 15:312-312(2014).
RN [3] {ECO:0000313|EnsemblPlants:KEH36833}
RP IDENTIFICATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:KEH36833};
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
RN [4] {ECO:0000313|EMBL:RHN72488.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:RHN72488.1};
RA Pecrix Y., Gamas P., Carrere S.;
RT "Whole-genome landscape of Medicago truncatula symbiotic genes.";
RL Nat. Plants 0:0-0(2018).
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DR EMBL; CM001218; KEH36833.1; -; Genomic_DNA.
DR EMBL; PSQE01000002; RHN72488.1; -; Genomic_DNA.
DR RefSeq; XP_013462798.1; XM_013607344.1.
DR AlphaFoldDB; A0A072V679; -.
DR STRING; 3880.A0A072V679; -.
DR EnsemblPlants; KEH36833; KEH36833; MTR_2g022910.
DR GeneID; 25486135; -.
DR Gramene; KEH36833; KEH36833; MTR_2g022910.
DR KEGG; mtr:25486135; -.
DR HOGENOM; CLU_435029_0_0_1; -.
DR OrthoDB; 449537at2759; -.
DR Proteomes; UP000002051; Chromosome 2.
DR Proteomes; UP000265566; Chromosome 2.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 6.10.140.2220; -; 1.
DR InterPro; IPR046824; Mss51-like_C.
DR InterPro; IPR002893; Znf_MYND.
DR PANTHER; PTHR47570:SF2; MYND-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47570; ZINC ION BINDING PROTEIN; 1.
DR Pfam; PF20179; MSS51_C; 1.
DR Pfam; PF01753; zf-MYND; 1.
DR SUPFAM; SSF144232; HIT/MYND zinc finger-like; 1.
DR PROSITE; PS01360; ZF_MYND_1; 1.
DR PROSITE; PS50865; ZF_MYND_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000002051};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00134}.
FT DOMAIN 287..328
FT /note="MYND-type"
FT /evidence="ECO:0000259|PROSITE:PS50865"
FT REGION 247..267
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 247..261
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 631 AA; 70142 MW; 3E84DA9D434092F5 CRC64;
MDLHLKSLFD RYQEQFGCGP GLGPGSGTCL MKIDGIVTNF IRSIYKASAA LYRTEPWKRL
RPGHYFGIRV GKDSDWSAKK QPFPCVQFVG GDGGDIGFYM YRSESDAKKM TGSRETVRVP
NVEVLRVTFE VESLMFPSNR KMIKSLSLEV SGSDRFPVID VARCTVAGDL RFRNPTLDEL
RFVYAFMKAI CMVHPLLLVD RDGGSKYSTM VCFEPFIETV DVQWPPEVTK GGYDLVAVTV
SHPPGQAYDE KSSSVSAGST PTKYVEPPRE DTFSDAIGYS STGLRQCAMC EREVFGEQSI
CCGRCRAVVY CSSICQKQNW NDTHRSLCGL YKAMMEREEE LAINIFLFPC SADQPCKWLE
SLDIHQKGMW RRKCSCYSHC PFGLLPVKGG IHEQWGELDD IEYPHDSSFN NHFVSSPLLL
SGWSEYYNLR SLPFSSPVAD ILSHPLTVYH ILTTLNISSK NLILKGKEVI IHYLGPEGEL
DWMPAFAEVG HLLNGLGNVQ IVMVGPEVPT NLSGTTSGIG SRVRVNLVRG VYQVEASYLP
SPHVVIGLNS RLENYSSWSG ALDLIKSIGV PAFFTDQSEV ACVNAKQVLR NAGLHVTHPV
TPNPFRSPVK NLMPSSNLPS YSNGFVFGVN T
//
