ID A0A072V894_MEDTR Unreviewed; 550 AA.
AC A0A072V894;
DT 01-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE SubName: Full=Putative transcription factor Nin-like family {ECO:0000313|EMBL:RHN67717.1};
DE SubName: Full=RWP-RK domain protein {ECO:0000313|EMBL:KEH34360.1};
GN OrderedLocusNames=MTR_3g465110 {ECO:0000313|EMBL:KEH34360.1};
GN ORFNames=MtrunA17_Chr3g0105711 {ECO:0000313|EMBL:RHN67717.1};
OS Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX NCBI_TaxID=3880 {ECO:0000313|EMBL:KEH34360.1, ECO:0000313|Proteomes:UP000002051};
RN [1] {ECO:0000313|EMBL:KEH34360.1, ECO:0000313|Proteomes:UP000002051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A17 {ECO:0000313|EMBL:KEH34360.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:KEH34360,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=22089132; DOI=10.1038/nature10625;
RA Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA Town C.D., Roe B.A.;
RT "The Medicago genome provides insight into the evolution of rhizobial
RT symbioses.";
RL Nature 480:520-524(2011).
RN [2] {ECO:0000313|EMBL:KEH34360.1, ECO:0000313|Proteomes:UP000002051}
RP GENOME REANNOTATION.
RC STRAIN=A17 {ECO:0000313|EMBL:KEH34360.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:KEH34360,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA Schwartz D.C., Town C.D.;
RT "An improved genome release (version Mt4.0) for the model legume Medicago
RT truncatula.";
RL BMC Genomics 15:312-312(2014).
RN [3] {ECO:0000313|EnsemblPlants:KEH34360}
RP IDENTIFICATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:KEH34360};
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
RN [4] {ECO:0000313|EMBL:RHN67717.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:RHN67717.1};
RA Pecrix Y., Gamas P., Carrere S.;
RT "Whole-genome landscape of Medicago truncatula symbiotic genes.";
RL Nat. Plants 0:0-0(2018).
CC -!- FUNCTION: Putative transcription factor.
CC {ECO:0000256|ARBA:ARBA00004049}.
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DR EMBL; CM001219; KEH34360.1; -; Genomic_DNA.
DR EMBL; PSQE01000003; RHN67717.1; -; Genomic_DNA.
DR RefSeq; XP_013460329.1; XM_013604875.1.
DR AlphaFoldDB; A0A072V894; -.
DR STRING; 3880.A0A072V894; -.
DR PaxDb; 3880-AES83756; -.
DR EnsemblPlants; KEH34360; KEH34360; MTR_3g465110.
DR Gramene; KEH34360; KEH34360; MTR_3g465110.
DR HOGENOM; CLU_547890_0_0_1; -.
DR Proteomes; UP000002051; Chromosome 3.
DR Proteomes; UP000265566; Chromosome 3.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR InterPro; IPR044607; RKD-like.
DR InterPro; IPR003035; RWP-RK_dom.
DR PANTHER; PTHR46373; PROTEIN RKD4; 1.
DR PANTHER; PTHR46373:SF2; RWP-RK DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF02042; RWP-RK; 1.
DR PROSITE; PS51519; RWP_RK; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000002051}.
FT DOMAIN 422..509
FT /note="RWP-RK"
FT /evidence="ECO:0000259|PROSITE:PS51519"
FT REGION 38..80
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 138..168
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 38..77
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 550 AA; 62292 MW; 1DC3C513620C0D14 CRC64;
MANRKNNPSI EGATFKFDDD DAIDPNFFNM SNPTLNDIYM NNNNNGPTNL SQPNHHSNLS
NPNPTNLSIN RNNNGPHQIY HGLGILQRGQ QSSNFNGHFS NPLSQQNCHG LGILLQGYGS
NEQFHTTLSQ QNHQNVVEHG HGSNIGNVPF NSNAMPQNDH GIQHGRSGNY DPFNYNLVSQ
ENDHGILQHG GGRNYDPFNY NLISPENDYG IQQGQDGNND LFSHAMSQQN HPGIQHGHGT
TNETFSLPMV QNQLGQPNNN VSFGMNNFEA GSSSRTNENQ QQTEALALDQ WPPEQQQNSS
SGSQVLRRII HSNGFQYENL EIHGSLELIT HAIHHVTPVN GGPTFDRMID FSGQGLGEIK
NFLDEYCIAR NSAGYFLIQD SMSTYYETLC TGYDWIDDIN MEGPIDNFSD EIMEQEQEQV
GEIETPEKRN LSEQRKRCAQ FTLADFVDYF HLPMEEAAAR MNIAASTLKK ISRRTKLRRW
PHRKVKCLLR QIAILQNQLD RQDPATRKRT EEEIKKIEQE MIADCRGHRP TALNYVANFL
PPEQLQQQQQ
//
