ID A0A072VD79_MEDTR Unreviewed; 288 AA.
AC A0A072VD79;
DT 01-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2014, sequence version 1.
DT 31-JUL-2019, entry version 29.
DE SubName: Full=Homeobox associated leucine zipper protein {ECO:0000313|EMBL:KEH39969.1};
DE SubName: Full=Putative transcription factor Homobox-WOX family {ECO:0000313|EMBL:RHN77180.1};
GN Name=25482022 {ECO:0000313|EnsemblPlants:KEH39969};
GN OrderedLocusNames=MTR_1g017090 {ECO:0000313|EMBL:KEH39969.1};
GN ORFNames=MtrunA17_Chr1g0151971 {ECO:0000313|EMBL:RHN77180.1};
OS Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
OC Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae;
OC 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade;
OC Trifolieae; Medicago.
OX NCBI_TaxID=3880 {ECO:0000313|EMBL:KEH39969.1, ECO:0000313|Proteomes:UP000002051};
RN [1] {ECO:0000313|EMBL:KEH39969.1, ECO:0000313|EnsemblPlants:KEH39969, ECO:0000313|Proteomes:UP000002051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A17 {ECO:0000313|EMBL:KEH39969.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:KEH39969,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=22089132; DOI=10.1038/nature10625;
RA Young N.D., Debelle F., Oldroyd G.E.D., Geurts R., Cannon S.B.,
RA Udvardi M.K., Benedito V.A., Mayer K.F.X., Gouzy J., Schoof H.,
RA Van de Peer Y., Proost S., Cook D.R., Meyers B.C., Spannagl M.,
RA Cheung F., De Mita S., Krishnakumar V., Gundlach H., Zhou S.,
RA Mudge J., Bharti A.K., Murray J.D., Naoumkina M.A., Rosen B.,
RA Silverstein K.A.T., Tang H., Rombauts S., Zhao P.X., Zhou P.,
RA Barbe V., Bardou P., Bechner M., Bellec A., Berger A., Berges H.,
RA Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA Deshpande S., Dai X., Doyle J.J., Dudez A.-M., Farmer A.D.,
RA Fouteau S., Franken C., Gibelin C., Gish J., Goldstein S.,
RA Gonzalez A.J., Green P.J., Hallab A., Hartog M., Hua A.,
RA Humphray S.J., Jeong D.-H., Jing Y., Jocker A., Kenton S.M.,
RA Kim D.-J., Klee K., Lai H., Lang C., Lin S., Macmil S.L.,
RA Magdelenat G., Matthews L., McCorrison J., Monaghan E.L., Mun J.-H.,
RA Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C.,
RA Sallet E., Samain S., Samson N., Sanders I., Saurat O., Scarpelli C.,
RA Schiex T., Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S.,
RA Singer S.R., Sinharoy S., Sterck L., Viollet A., Wang B.-B., Wang K.,
RA Wang M., Wang X., Warfsmann J., Weissenbach J., White D.D.,
RA White J.D., Wiley G.B., Wincker P., Xing Y., Yang L., Yao Z., Ying F.,
RA Zhai J., Zhou L., Zuber A., Denarie J., Dixon R.A., May G.D.,
RA Schwartz D.C., Rogers J., Quetier F., Town C.D., Roe B.A.;
RT "The Medicago genome provides insight into the evolution of rhizobial
RT symbioses.";
RL Nature 480:520-524(2011).
RN [2] {ECO:0000313|EMBL:KEH39969.1, ECO:0000313|EnsemblPlants:KEH39969, ECO:0000313|Proteomes:UP000002051}
RP GENOME REANNOTATION.
RC STRAIN=A17 {ECO:0000313|EMBL:KEH39969.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:KEH39969,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA Schwartz D.C., Town C.D.;
RT "An improved genome release (version Mt4.0) for the model legume
RT Medicago truncatula.";
RL BMC Genomics 15:312-312(2014).
RN [3] {ECO:0000313|EnsemblPlants:KEH39969}
RP IDENTIFICATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:KEH39969};
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
RN [4] {ECO:0000313|Proteomes:UP000265566}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Jemalong A17 {ECO:0000313|Proteomes:UP000265566};
RX PubMed=30397259; DOI=10.1038/s41477-018-0286-7;
RA Pecrix Y., Staton S.E., Sallet E., Lelandais-Briere C., Moreau S.,
RA Carrere S., Blein T., Jardinaud M.F., Latrasse D., Zouine M., Zahm M.,
RA Kreplak J., Mayjonade B., Satge C., Perez M., Cauet S., Marande W.,
RA Chantry-Darmon C., Lopez-Roques C., Bouchez O., Berard A., Debelle F.,
RA Munos S., Bendahmane A., Berges H., Niebel A., Buitink J., Frugier F.,
RA Benhamed M., Crespi M., Gouzy J., Gamas P.;
RT "Whole-genome landscape of Medicago truncatula symbiotic genes.";
RL Nat. Plants 4:1017-1025(2018).
RN [5] {ECO:0000313|EMBL:RHN77180.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:RHN77180.1};
RA Pecrix Y., Gamas P., Carrere S.;
RT "Whole-genome landscape of Medicago truncatula symbiotic genes.";
RL Nat. Plants 0:0-0(2018).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PROSITE-
CC ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
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DR EMBL; CM001217; KEH39969.1; -; Genomic_DNA.
DR EMBL; PSQE01000001; RHN77180.1; -; Genomic_DNA.
DR RefSeq; XP_013465933.1; XM_013610479.1.
DR EnsemblPlants; KEH39969; KEH39969; MTR_1g017090.
DR GeneID; 25482022; -.
DR Gramene; KEH39969; KEH39969; MTR_1g017090.
DR KEGG; mtr:MTR_1g017090; -.
DR KO; K09338; -.
DR OrthoDB; 1516249at2759; -.
DR Proteomes; UP000002051; Chromosome 1.
DR Proteomes; UP000265566; Chromosome 1.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR CDD; cd00086; homeodomain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017970; Homeobox_CS.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR003106; Leu_zip_homeo.
DR Pfam; PF02183; HALZ; 1.
DR Pfam; PF00046; Homeodomain; 1.
DR SMART; SM00340; HALZ; 1.
DR SMART; SM00389; HOX; 1.
DR SUPFAM; SSF46689; SSF46689; 1.
DR PROSITE; PS00027; HOMEOBOX_1; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Complete proteome {ECO:0000313|Proteomes:UP000002051,
KW ECO:0000313|Proteomes:UP000265566};
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108,
KW ECO:0000256|RuleBase:RU000682, ECO:0000313|EMBL:KEH39969.1};
KW Homeobox {ECO:0000256|PROSITE-ProRule:PRU00108,
KW ECO:0000256|RuleBase:RU000682, ECO:0000313|EMBL:KEH39969.1};
KW Nucleus {ECO:0000256|PROSITE-ProRule:PRU00108,
KW ECO:0000256|RuleBase:RU000682};
KW Reference proteome {ECO:0000313|Proteomes:UP000002051}.
FT DOMAIN 125 185 Homeobox. {ECO:0000259|PROSITE:PS50071}.
FT DNA_BIND 127 186 Homeobox. {ECO:0000256|PROSITE-ProRule:
FT PRU00108}.
FT REGION 53 99 Disordered. {ECO:0000256|SAM:MobiDB-
FT lite}.
FT COILED 184 221 {ECO:0000256|SAM:Coils}.
FT COMPBIAS 69 99 Polar. {ECO:0000256|SAM:MobiDB-lite}.
SQ SEQUENCE 288 AA; 32840 MW; BA95249F280A0C95 CRC64;
MNVDDTSNTW FQLDLDLGLA LHDHFDDHRK RESKKKRVEN PSKCIKAYQM LTLGPSKEES
EENTKIQHST SKTESCDQNL PTQFTSPSIE SSFSNSTSIK KESGEEFEVE IEKVPITRIG
NFDKDCNPRK KLRLTKEQSE VLEENFREHS TLNPKQKQAL ANKLNLQARQ VEVWFQNRRA
RTKLKQTESD CEVLKKCCES LTEENKKLQK ELQELKSMQT VAAASFYMKI PAATLTICPS
CETICGGNNN GSLPSTTLLI GSKTHHHFHK NNKNDDNYQF PHSSSAAC
//
