ID A0A072VRJ5_MEDTR Unreviewed; 521 AA.
AC A0A072VRJ5;
DT 01-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2014, sequence version 1.
DT 24-JAN-2024, entry version 49.
DE SubName: Full=Putative transcription factor bHLH family {ECO:0000313|EMBL:RHN82554.1};
DE SubName: Full=Transcription factor aborted microspores-like protein {ECO:0000313|EMBL:KEH44367.1};
GN Name=25485620 {ECO:0000313|EnsemblPlants:KEH44367};
GN OrderedLocusNames=MTR_1g112680 {ECO:0000313|EMBL:KEH44367.1};
GN ORFNames=MtrunA17_Chr1g0211081 {ECO:0000313|EMBL:RHN82554.1};
OS Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX NCBI_TaxID=3880 {ECO:0000313|EMBL:KEH44367.1, ECO:0000313|Proteomes:UP000002051};
RN [1] {ECO:0000313|EMBL:KEH44367.1, ECO:0000313|Proteomes:UP000002051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A17 {ECO:0000313|EMBL:KEH44367.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:KEH44367,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=22089132; DOI=10.1038/nature10625;
RA Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA Town C.D., Roe B.A.;
RT "The Medicago genome provides insight into the evolution of rhizobial
RT symbioses.";
RL Nature 480:520-524(2011).
RN [2] {ECO:0000313|EMBL:KEH44367.1, ECO:0000313|Proteomes:UP000002051}
RP GENOME REANNOTATION.
RC STRAIN=A17 {ECO:0000313|EMBL:KEH44367.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:KEH44367,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA Schwartz D.C., Town C.D.;
RT "An improved genome release (version Mt4.0) for the model legume Medicago
RT truncatula.";
RL BMC Genomics 15:312-312(2014).
RN [3] {ECO:0000313|EnsemblPlants:KEH44367}
RP IDENTIFICATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:KEH44367};
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
RN [4] {ECO:0000313|EMBL:RHN82554.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:RHN82554.1};
RA Pecrix Y., Gamas P., Carrere S.;
RT "Whole-genome landscape of Medicago truncatula symbiotic genes.";
RL Nat. Plants 0:0-0(2018).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; CM001217; KEH44367.1; -; Genomic_DNA.
DR EMBL; PSQE01000001; RHN82554.1; -; Genomic_DNA.
DR RefSeq; XP_013470329.1; XM_013614875.1.
DR AlphaFoldDB; A0A072VRJ5; -.
DR SMR; A0A072VRJ5; -.
DR STRING; 3880.A0A072VRJ5; -.
DR EnsemblPlants; KEH44367; KEH44367; MTR_1g112680.
DR GeneID; 25485620; -.
DR Gramene; KEH44367; KEH44367; MTR_1g112680.
DR KEGG; mtr:25485620; -.
DR HOGENOM; CLU_037477_0_0_1; -.
DR OrthoDB; 1213809at2759; -.
DR Proteomes; UP000002051; Chromosome 1.
DR Proteomes; UP000265566; Chromosome 1.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IBA:GO_Central.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IBA:GO_Central.
DR CDD; cd04873; ACT_UUR-ACR-like; 1.
DR CDD; cd11443; bHLH_AtAMS_like; 1.
DR Gene3D; 4.10.280.10; Helix-loop-helix DNA-binding domain; 1.
DR InterPro; IPR002912; ACT_dom.
DR InterPro; IPR011598; bHLH_dom.
DR InterPro; IPR036638; HLH_DNA-bd_sf.
DR InterPro; IPR025610; MYC/MYB_N.
DR PANTHER; PTHR31945:SF11; TRANSCRIPTION FACTOR ABORTED MICROSPORES; 1.
DR PANTHER; PTHR31945; TRANSCRIPTION FACTOR SCREAM2-RELATED; 1.
DR Pfam; PF14215; bHLH-MYC_N; 1.
DR Pfam; PF00010; HLH; 1.
DR SMART; SM00353; HLH; 1.
DR SUPFAM; SSF47459; HLH, helix-loop-helix DNA-binding domain; 1.
DR PROSITE; PS51671; ACT; 1.
DR PROSITE; PS50888; BHLH; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000002051};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 313..362
FT /note="BHLH"
FT /evidence="ECO:0000259|PROSITE:PS50888"
FT DOMAIN 450..521
FT /note="ACT"
FT /evidence="ECO:0000259|PROSITE:PS51671"
FT REGION 240..263
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 280..324
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 352..379
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 247..262
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 521 AA; 59115 MW; 3BB69843C0CBFEC8 CRC64;
MNNFIMQNIT ERLRPLVGLN GWDYCVYWKL SEDQRYLEWL GCCCGGSESN QNGGEEHLFP
VSSCRDTMFS HPRTNSCDLL SQLSTSIPID SGIHAQTLLT NQPNWLNYPN SLDPNTLHET
INGTHVLIPV PGGLVELFVT KQVGEDQNVI DFITSQCIVM VDQEGMNHSI GFNSMSNMQS
NVGDENDNTN NIFHPSETLN LPHDISVLNF MQQFNYSYNQ QQNRIKNDGT FSEEYLGPFL
HDHENNNTLK SNTEEEHDSK SLMTENNQYV FVDPLDTKKK QENVVGRSDS MSDCSDQNEE
EDDGKYRRRS GKGNQSKNLV AERKRRKKLN DRLYNLRSLV PRISKLDRAS ILGDAIEFVK
DLQKQVKELQ DELEENSETG TESNCVYVDG VQVKANNNNN VTKAEHGFHV GNGYVSKQKQ
EDVGTVVTDK QTQQMEAQVE VAQIDGNEYF VKVFCEHRPG GFVKLMDAFN TLGMDVMHAT
VTSHKGLVSN VFKVEKKESE IVEAEEVRDS LLELTRNKSE S
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