ID A0A072VSF4_MEDTR Unreviewed; 340 AA.
AC A0A072VSF4;
DT 01-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2014, sequence version 1.
DT 13-SEP-2023, entry version 39.
DE SubName: Full=Auxin canalization protein {ECO:0000313|EMBL:KEH41060.1};
GN Name=25482955 {ECO:0000313|EnsemblPlants:KEH41060};
GN OrderedLocusNames=MTR_1g041395 {ECO:0000313|EMBL:KEH41060.1};
OS Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX NCBI_TaxID=3880 {ECO:0000313|EMBL:KEH41060.1, ECO:0000313|Proteomes:UP000002051};
RN [1] {ECO:0000313|EMBL:KEH41060.1, ECO:0000313|Proteomes:UP000002051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A17 {ECO:0000313|EMBL:KEH41060.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:KEH41060,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=22089132; DOI=10.1038/nature10625;
RA Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA Town C.D., Roe B.A.;
RT "The Medicago genome provides insight into the evolution of rhizobial
RT symbioses.";
RL Nature 480:520-524(2011).
RN [2] {ECO:0000313|EMBL:KEH41060.1, ECO:0000313|Proteomes:UP000002051}
RP GENOME REANNOTATION.
RC STRAIN=A17 {ECO:0000313|EMBL:KEH41060.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:KEH41060,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA Schwartz D.C., Town C.D.;
RT "An improved genome release (version Mt4.0) for the model legume Medicago
RT truncatula.";
RL BMC Genomics 15:312-312(2014).
RN [3] {ECO:0000313|EnsemblPlants:KEH41060}
RP IDENTIFICATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:KEH41060};
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
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DR EMBL; CM001217; KEH41060.1; -; Genomic_DNA.
DR RefSeq; XP_013467025.1; XM_013611571.1.
DR AlphaFoldDB; A0A072VSF4; -.
DR EnsemblPlants; KEH41060; KEH41060; MTR_1g041395.
DR Gramene; KEH41060; KEH41060; MTR_1g041395.
DR HOGENOM; CLU_033023_0_1_1; -.
DR Proteomes; UP000002051; Chromosome 1.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR InterPro; IPR013666; PH_pln.
DR InterPro; IPR040269; VAB.
DR InterPro; IPR008546; VAN3-bd-like_auxin_canal.
DR PANTHER; PTHR31351:SF17; AUXIN CANALIZATION PROTEIN; 1.
DR PANTHER; PTHR31351; EXPRESSED PROTEIN; 1.
DR Pfam; PF05703; Auxin_canalis; 1.
DR Pfam; PF08458; PH_2; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000002051};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 61..85
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 2..180
FT /note="VAN3-binding protein-like auxin canalisation"
FT /evidence="ECO:0000259|Pfam:PF05703"
FT DOMAIN 225..329
FT /note="Pleckstrin-like plant"
FT /evidence="ECO:0000259|Pfam:PF08458"
SQ SEQUENCE 340 AA; 36246 MW; 8CED70613C4AB1BA CRC64;
MDDFKYNRSS NNHNNNSIIS SLNNHYRVSA TGGGGGGGKT VGRWLKERKE KKKEETRAHN
AQLHAAVSVA GVAAAVAAIA AATAASSGAR KDEQMAKTDM AVASAATLVA AQCVEAAVAM
GAERDHIDSV VSSAVNVRSS GDIQTLTAAA ATALRGAATL KARALKEVWS IAAVIPVEKN
LVGNGNGGGG SGSNGSSNSS FSGELAPEEN FLGICSRELL ARGFELLKRT RTGELHWKIV
SVYINRTNQV MLKMKSRHVA GTITKKKKNV VIGVIKEMPA WPGRHLLEGG DNRRYFGLKT
ITRGVVEFEC RSQREYDVWT QGVSRLISIA AERNNKNRTC
//
