ID   A0A076MSS0_AMYME        Unreviewed;       395 AA.
AC   A0A076MSS0;
DT   29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT   29-OCT-2014, sequence version 1.
DT   24-JAN-2024, entry version 21.
DE   SubName: Full=ATP-dependent DNA ligase {ECO:0000313|EMBL:AIJ23679.1};
GN   Name=lig {ECO:0000313|EMBL:AIJ23679.1};
GN   ORFNames=AMETH_3587 {ECO:0000313|EMBL:AIJ23679.1};
OS   Amycolatopsis methanolica 239.
OC   Bacteria; Actinomycetota; Actinomycetes; Pseudonocardiales;
OC   Pseudonocardiaceae; Amycolatopsis; Amycolatopsis methanolica group.
OX   NCBI_TaxID=1068978 {ECO:0000313|EMBL:AIJ23679.1, ECO:0000313|Proteomes:UP000062973};
RN   [1] {ECO:0000313|EMBL:AIJ23679.1, ECO:0000313|Proteomes:UP000062973}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=239 {ECO:0000313|EMBL:AIJ23679.1,
RC   ECO:0000313|Proteomes:UP000062973};
RA   Tang B.;
RT   "Whole Genome Sequence of the Amycolatopsis methanolica 239.";
RL   Submitted (JUL-2014) to the EMBL/GenBank/DDBJ databases.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP009110; AIJ23679.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A076MSS0; -.
DR   STRING; 1068978.AMETH_3587; -.
DR   KEGG; amq:AMETH_3587; -.
DR   PATRIC; fig|1068978.7.peg.3832; -.
DR   eggNOG; COG1793; Bacteria.
DR   eggNOG; COG3285; Bacteria.
DR   HOGENOM; CLU_008325_6_1_11; -.
DR   Proteomes; UP000062973; Chromosome.
DR   GO; GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
DR   Gene3D; 3.90.920.10; DNA primase, PRIM domain; 1.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   NCBIfam; TIGR02777; LigD_PE_dom; 1.
DR   PANTHER; PTHR42705:SF3; -; 1.
DR   PANTHER; PTHR42705; BIFUNCTIONAL NON-HOMOLOGOUS END JOINING PROTEIN LIGD; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   Pfam; PF21686; LigD_Prim-Pol; 1.
PE   4: Predicted;
KW   Ligase {ECO:0000313|EMBL:AIJ23679.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000062973}.
FT   DOMAIN          12..101
FT                   /note="DNA ligase D 3'-phosphoesterase"
FT                   /evidence="ECO:0000259|Pfam:PF13298"
FT   DOMAIN          214..394
FT                   /note="DNA ligase D polymerase"
FT                   /evidence="ECO:0000259|Pfam:PF21686"
SQ   SEQUENCE   395 AA;  43774 MW;  6AF747A572501C61 CRC64;
     MVRTSASFLV PVLASWAVPK GPTLDPGVRQ LAVHVEDHPL EYADFEGVIP EGQYGGGDVI
     VWDRGTWEPA DGADPARAID DGELHFDLRG EKLAGRFALV RTARRGKEQW LLIHKHDEDA
     RPGWDPEELP RSVKSGRTND EVAAAPEAMW RSGVPAAEAE VPLVPQWTPP SDDELAALDD
     LGRSGTWTIA GRRLKLTNLD KVRFPGAGGE PPVTKRELIR YSAQIATHML PHLAGRPVNA
     HRYPDGVDRP GFWHKEVPSH APEWLNRWHN TEADPGETQC YAVLDSVPAL VWMASFGGVE
     LHPWTSRLPD VHQPTWALID IDPGTTTGFD DIVELARLYR TALEHLDLRG MPKVTGQRGI
     QIWVPVAPGH TFTDTRKWVE TLSRVVGRVL PDLVS
//