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Database: UniProt
Entry: A0A076N4Z2_AMYME
LinkDB: A0A076N4Z2_AMYME
Original site: A0A076N4Z2_AMYME 
ID   A0A076N4Z2_AMYME        Unreviewed;       254 AA.
AC   A0A076N4Z2;
DT   29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT   29-OCT-2014, sequence version 1.
DT   24-JAN-2024, entry version 33.
DE   SubName: Full=RNA methyltransferase YjfH {ECO:0000313|EMBL:AIJ25880.1};
GN   Name=yjfH {ECO:0000313|EMBL:AIJ25880.1};
GN   ORFNames=AMETH_5788 {ECO:0000313|EMBL:AIJ25880.1};
OS   Amycolatopsis methanolica 239.
OC   Bacteria; Actinomycetota; Actinomycetes; Pseudonocardiales;
OC   Pseudonocardiaceae; Amycolatopsis; Amycolatopsis methanolica group.
OX   NCBI_TaxID=1068978 {ECO:0000313|EMBL:AIJ25880.1, ECO:0000313|Proteomes:UP000062973};
RN   [1] {ECO:0000313|EMBL:AIJ25880.1, ECO:0000313|Proteomes:UP000062973}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=239 {ECO:0000313|EMBL:AIJ25880.1,
RC   ECO:0000313|Proteomes:UP000062973};
RA   Tang B.;
RT   "Whole Genome Sequence of the Amycolatopsis methanolica 239.";
RL   Submitted (JUL-2014) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the class IV-like SAM-binding methyltransferase
CC       superfamily. RNA methyltransferase TrmH family.
CC       {ECO:0000256|ARBA:ARBA00007228}.
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DR   EMBL; CP009110; AIJ25880.1; -; Genomic_DNA.
DR   RefSeq; WP_017984715.1; NZ_CP009110.1.
DR   AlphaFoldDB; A0A076N4Z2; -.
DR   STRING; 1068978.AMETH_5788; -.
DR   KEGG; amq:AMETH_5788; -.
DR   PATRIC; fig|1068978.7.peg.6213; -.
DR   eggNOG; COG0566; Bacteria.
DR   HOGENOM; CLU_021322_0_1_11; -.
DR   OrthoDB; 9785673at2; -.
DR   Proteomes; UP000062973; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProt.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
DR   GO; GO:0001510; P:RNA methylation; IEA:GOC.
DR   GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR   CDD; cd18095; SpoU-like_rRNA-MTase; 1.
DR   Gene3D; 3.30.1330.30; -; 1.
DR   Gene3D; 3.40.1280.10; -; 1.
DR   InterPro; IPR029028; Alpha/beta_knot_MTases.
DR   InterPro; IPR029064; Ribosomal_eL30-like_sf.
DR   InterPro; IPR004441; rRNA_MeTrfase_TrmH.
DR   InterPro; IPR001537; SpoU_MeTrfase.
DR   InterPro; IPR013123; SpoU_subst-bd.
DR   InterPro; IPR029026; tRNA_m1G_MTases_N.
DR   PANTHER; PTHR46429; 23S RRNA (GUANOSINE-2'-O-)-METHYLTRANSFERASE RLMB; 1.
DR   PANTHER; PTHR46429:SF1; 23S RRNA (GUANOSINE-2'-O-)-METHYLTRANSFERASE RLMB; 1.
DR   Pfam; PF00588; SpoU_methylase; 1.
DR   Pfam; PF08032; SpoU_sub_bind; 1.
DR   SMART; SM00967; SpoU_sub_bind; 1.
DR   SUPFAM; SSF75217; alpha/beta knot; 1.
DR   SUPFAM; SSF55315; L30e-like; 1.
PE   3: Inferred from homology;
KW   Methyltransferase {ECO:0000313|EMBL:AIJ25880.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000062973};
KW   Transferase {ECO:0000313|EMBL:AIJ25880.1}.
FT   DOMAIN          16..93
FT                   /note="RNA 2-O ribose methyltransferase substrate binding"
FT                   /evidence="ECO:0000259|SMART:SM00967"
SQ   SEQUENCE   254 AA;  25922 MW;  AFE5D8F7C448ACCD CRC64;
     MLVAETTVSP KDRFLTVYGR KPVLEALDDP ELRVDKVILA DTARGPAAAE IQRAAKAAGV
     PVQRASAHRV KVLAGNGKQD QGVLADVVAP LMRPLSAALA DAPARVLLLD GITTPANVGM
     ILRTATAAGL GGIVVPRRGV AALDPLVVKA SAGVAFRAPV LRCATAAEAA SMLVEAGYGL
     YALGAQGGSS LFEAPLLERA AFVLGGETAG VSDEVASLVT GWLSIPMPGE VESLNVSAAA
     AVLCFELVRR GTTR
//
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