ID A0A077FLD3_9RICK Unreviewed; 386 AA.
AC A0A077FLD3;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 24-JAN-2024, entry version 27.
DE SubName: Full=Ribonuclease D {ECO:0000313|EMBL:AIL64869.1};
DE EC=3.1.13.5 {ECO:0000313|EMBL:AIL64869.1};
GN Name=rnd {ECO:0000313|EMBL:AIL64869.1};
GN ORFNames=NOVO_02375 {ECO:0000313|EMBL:AIL64869.1};
OS Rickettsiales bacterium Ac37b.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rickettsiales.
OX NCBI_TaxID=1528098 {ECO:0000313|EMBL:AIL64869.1, ECO:0000313|Proteomes:UP000028936};
RN [1] {ECO:0000313|EMBL:AIL64869.1, ECO:0000313|Proteomes:UP000028936}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Ac37b {ECO:0000313|EMBL:AIL64869.1,
RC ECO:0000313|Proteomes:UP000028936};
RA Felsheim R.F., Kurtti T.J., Johnson S., Labruna M.B., Munderloh U.G.;
RT "Genome sequence of a novel Rickettsiales species cultured from Amblyomma
RT cajennense.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP009217; AIL64869.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A077FLD3; -.
DR STRING; 1528098.NOVO_02375; -.
DR KEGG; rbt:NOVO_02375; -.
DR eggNOG; COG0349; Bacteria.
DR HOGENOM; CLU_042387_0_0_5; -.
DR OrthoDB; 9800549at2; -.
DR Proteomes; UP000028936; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR GO; GO:0033890; F:ribonuclease D activity; IEA:UniProtKB-EC.
DR GO; GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
DR CDD; cd06142; RNaseD_exo; 1.
DR Gene3D; 1.10.150.80; HRDC domain; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR002562; 3'-5'_exonuclease_dom.
DR InterPro; IPR010997; HRDC-like_sf.
DR InterPro; IPR002121; HRDC_dom.
DR InterPro; IPR044876; HRDC_dom_sf.
DR InterPro; IPR006292; RNase_D.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR NCBIfam; TIGR01388; rnd; 1.
DR PANTHER; PTHR47649; RIBONUCLEASE D; 1.
DR PANTHER; PTHR47649:SF1; RIBONUCLEASE D; 1.
DR Pfam; PF01612; DNA_pol_A_exo1; 1.
DR Pfam; PF00570; HRDC; 1.
DR SMART; SM00474; 35EXOc; 1.
DR SMART; SM00341; HRDC; 1.
DR SUPFAM; SSF47819; HRDC-like; 2.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50967; HRDC; 1.
PE 4: Predicted;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839};
KW Hydrolase {ECO:0000313|EMBL:AIL64869.1};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000028936};
KW tRNA processing {ECO:0000256|ARBA:ARBA00022694}.
FT DOMAIN 208..291
FT /note="HRDC"
FT /evidence="ECO:0000259|PROSITE:PS50967"
SQ SEQUENCE 386 AA; 44407 MW; 57B90BF7075069F8 CRC64;
MTIITTTAEL NNLCNLLNSQ SFITIDTEFL RDKTYFPKLC LIQIGLDNHT VIIDALSPHL
DITPLFYIFN NDNIIKVFHA ATQDLEIIFR LSGTIPYPIF DTQTAAMFCG LGCSISYNNL
STQLIGVQID KTYQFTDWSL RPLSNAQITY ALNDVHYLRD IYIKLRKKLL ELNRLKWLEE
EMLLIRNPTN YINNPEHAWI KIKSKIKNKN AIPLLQKLAA WREINAQQLD VPRGHLLKDN
TLIEICKILP DSLIQLKSII TPANKHFIRN KTLKASLFNT IQESYISMEA KLSFSIEDSS
ATNRTLYSML KLLLKSKSTE YNISPNIIAS DEELLTISSN EKALSSYLIK TMQGWRYDIF
GKYAIDLQQG KIALTMRNNN IYVIEL
//
