ID A0A077M1B5_9MICO Unreviewed; 572 AA.
AC A0A077M1B5;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 24-JAN-2024, entry version 26.
DE RecName: Full=GIY-YIG domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=BN12_760007 {ECO:0000313|EMBL:CCH80118.1};
OS Tetrasphaera japonica T1-X7.
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Intrasporangiaceae;
OC Tetrasphaera.
OX NCBI_TaxID=1194083 {ECO:0000313|EMBL:CCH80118.1, ECO:0000313|Proteomes:UP000035721};
RN [1] {ECO:0000313|EMBL:CCH80118.1, ECO:0000313|Proteomes:UP000035721}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=T1-X7 {ECO:0000313|EMBL:CCH80118.1,
RC ECO:0000313|Proteomes:UP000035721};
RX PubMed=23178666; DOI=10.1038/ismej.2012.136;
RA Kristiansen R., Nguyen H.T.T., Saunders A.M., Nielsen J.L., Wimmer R.,
RA Le V.Q., McIlroy S.J., Petrovski S., Seviour R.J., Calteau A.,
RA Nielsen K.L., Nielsen P.H.;
RT "A metabolic model for members of the genus Tetrasphaera involved in
RT enhanced biological phosphorus removal.";
RL ISME J. 7:543-554(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCH80118.1}.
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DR EMBL; CAJB01000410; CCH80118.1; -; Genomic_DNA.
DR RefSeq; WP_048552105.1; NZ_HF570958.1.
DR AlphaFoldDB; A0A077M1B5; -.
DR STRING; 1194083.BN12_760007; -.
DR OrthoDB; 9803913at2; -.
DR Proteomes; UP000035721; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:InterPro.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProt.
DR GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
DR CDD; cd06127; DEDDh; 1.
DR CDD; cd10434; GIY-YIG_UvrC_Cho; 1.
DR Gene3D; 3.40.1440.10; GIY-YIG endonuclease; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR006054; DnaQ.
DR InterPro; IPR013520; Exonuclease_RNaseT/DNA_pol3.
DR InterPro; IPR000305; GIY-YIG_endonuc.
DR InterPro; IPR035901; GIY-YIG_endonuc_sf.
DR InterPro; IPR047296; GIY-YIG_UvrC_Cho.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR001943; UVR_dom.
DR InterPro; IPR036876; UVR_dom_sf.
DR NCBIfam; TIGR00573; dnaq; 1.
DR PANTHER; PTHR30562:SF1; UVRABC SYSTEM PROTEIN C; 1.
DR PANTHER; PTHR30562; UVRC/OXIDOREDUCTASE; 1.
DR Pfam; PF01541; GIY-YIG; 1.
DR Pfam; PF00929; RNase_T; 1.
DR SMART; SM00479; EXOIII; 1.
DR SMART; SM00465; GIYc; 1.
DR SUPFAM; SSF46600; C-terminal UvrC-binding domain of UvrB; 1.
DR SUPFAM; SSF82771; GIY-YIG endonuclease; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50164; GIY_YIG; 1.
DR PROSITE; PS50151; UVR; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000035721}.
FT DOMAIN 219..297
FT /note="GIY-YIG"
FT /evidence="ECO:0000259|PROSITE:PS50164"
FT DOMAIN 407..442
FT /note="UVR"
FT /evidence="ECO:0000259|PROSITE:PS50151"
SQ SEQUENCE 572 AA; 61472 MW; 2BE7BB4C523F9D3D CRC64;
MPMVQGTLDD LGTALHAVTF VVVDLETTGG SPQDCGITEI GAVKVRGGEV LGEFQTLVDP
GEPIPAFISV LTGITDAMVR EAPRVEAALG AFLDFAGDAV LVAHNAGFDI SFLRAAAAQA
GRPWPGNQVL DTVHLARQLL GRDEVPNHKL SSLAAHFGAT TTPDHRALHD AQATVDVLHG
LIGRVGSLGV HSLEELMAYS ARVSQATRRK RWLADDLPHA PGVYVFKDDR GHVLYVGTSV
DIRTRVRSYF TASEKRSRMG EMVRLAASVT PVVCATTLEA EVRELRLIAE HKPRYNRRST
RPERAQWVKL TVESFPRLSV VRTVAPDGAR YVGPFGSRAA AEEAIAAVHE VLPLRQCATR
LSVTRPSPAC ALAELGRCGA PCTGAQSVES YAAIVDQAVA LLAGDGRRVM RALTRRMRIL
AEQERFEDAG ALRDRVLHLV RGVDRAQRME PLARSPELVA ARPSVRGGWD LVCVRYGHLA
ASTHAPRGAD PMPYVEALRA SAEQVEAGCA PAPAGLTEET EKVLRWLETP GVRIVHLDGE
WTCPVGGLGS ARAELEPLAT ARRQVAGFVA TA
//
