ID A0A077Z7Z3_TRITR Unreviewed; 627 AA.
AC A0A077Z7Z3;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE SubName: Full=WD40 and TFIID 90kDa domain containing protein {ECO:0000313|EMBL:CDW55889.1};
GN ORFNames=TTRE_0000416301 {ECO:0000313|EMBL:CDW55889.1};
OS Trichuris trichiura (Whipworm) (Trichocephalus trichiurus).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichuridae; Trichuris.
OX NCBI_TaxID=36087 {ECO:0000313|EMBL:CDW55889.1};
RN [1] {ECO:0000313|EMBL:CDW55889.1}
RP NUCLEOTIDE SEQUENCE.
RA Aslett M.;
RL Submitted (JAN-2014) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:CDW55889.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Foth B.J., Tsai I.J., Reid A.J., Bancroft A.J., Nichol S., Tracey A.,
RA Holroyd N., Cotton J.A., Stanley E.J., Zarowiecki M., Liu J.Z.,
RA Huckvale T., Cooper P.J., Grencis R.K., Berriman M.;
RT "The whipworm genome and dual-species transcriptomics of an intimate host-
RT pathogen interaction.";
RL Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the WD repeat TAF5 family.
CC {ECO:0000256|ARBA:ARBA00009435}.
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DR EMBL; HG805990; CDW55889.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A077Z7Z3; -.
DR STRING; 36087.A0A077Z7Z3; -.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 1.25.40.500; TFIID subunit TAF5, NTD2 domain; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR007582; TFIID_NTD2.
DR InterPro; IPR037264; TFIID_NTD2_sf.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR19879:SF7; PROTEASOMAL ATPASE-ASSOCIATED FACTOR 1; 1.
DR PANTHER; PTHR19879; TRANSCRIPTION INITIATION FACTOR TFIID; 1.
DR Pfam; PF04494; TFIID_NTD2; 1.
DR Pfam; PF00400; WD40; 3.
DR SMART; SM00320; WD40; 6.
DR SUPFAM; SSF160897; Taf5 N-terminal domain-like; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 2.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT DOMAIN 80..188
FT /note="TFIID subunit TAF5 NTD2"
FT /evidence="ECO:0000259|Pfam:PF04494"
FT REPEAT 378..419
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 462..503
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
SQ SEQUENCE 627 AA; 69741 MW; FF88F7BEC86EA0DC CRC64;
MNQSQERFEK TPLSIDTIMQ ILRKKNLFLT EKALLAELSE SVGCGSSASF VRDLDVDLSK
ESTFRDTVYT ADCDLSLCFD EYDRFLQWAT AVEPDRLRPE LSALLFPLFV HLCIDLLRFG
KPSVFRTFVD RFSAEQQPFY GEYVADLARM RSIDDLTSSS VVQILRSNRY VVLLSVESKQ
KLLPMVNHLR LVSAVIQSHI CLCIHQGPSR TDDVIKRVSG CLTGECPFNI SESHVSYGLF
RFVPNPELLE FALICLNRAD GAGKLLEIDQ TFGSFQPTAN SPEWDRIPLP SVSKEMQVNQ
LVALLDEKKR KPLQIDPKMS IYFYTILDQV SSPCCFDITD DSELLAVGNS DSSVSLYSLS
PYTFTSGFSQ KMEGKSKLLG HCNPVYGVSC QCDKRLLFSC SSDGSCLLWT LEQLRLLNVY
KLGLSPLWDV ASAPFGGYFA TAGANGLALV WNVERKSPVR VLQGHYCDVN KVIFHPNSNY
VATASDDRTA RLWDLRNGQC VRLFTGAKSG IGSISFSHAG DSLASGTLNG EMLCWHIGQS
KLLADRLLHN KCTYTLAYSM EDSILATGGL DDTVTLSNLS EGAMTQLCTF KTKSIPVLHL
HFTRRNLLLG FGYHGVPADI IVVRAAL
//
