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Database: UniProt
Entry: A0A078EKT7_BRANA
LinkDB: A0A078EKT7_BRANA
Original site: A0A078EKT7_BRANA 
ID   A0A078EKT7_BRANA        Unreviewed;       634 AA.
AC   A0A078EKT7;
DT   29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT   29-OCT-2014, sequence version 1.
DT   24-JAN-2024, entry version 36.
DE   SubName: Full=BnaC05g32120D protein {ECO:0000313|EMBL:CDY29458.1};
DE   SubName: Full=BnaC05g32130D protein {ECO:0000313|EMBL:CDY29457.1};
GN   Name=BnaC05g32120D {ECO:0000313|EMBL:CDY29458.1};
GN   Synonyms=BnaC05g32130D {ECO:0000313|EMBL:CDY29457.1};
GN   ORFNames=GSBRNA2T00043082001 {ECO:0000313|EMBL:CDY29457.1},
GN   GSBRNA2T00043092001 {ECO:0000313|EMBL:CDY29458.1};
OS   Brassica napus (Rape).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX   NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY29458.1, ECO:0000313|Proteomes:UP000028999};
RN   [1] {ECO:0000313|EMBL:CDY29458.1, ECO:0000313|Proteomes:UP000028999}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX   PubMed=25146293; DOI=10.1126/science.1253435;
RA   Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA   Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA   Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA   Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA   Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA   Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA   Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA   Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA   Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA   Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA   Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA   Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA   Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT   "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT   Brassica napus oilseed genome.";
RL   Science 345:950-953(2014).
RN   [2] {ECO:0000313|EMBL:CDY29458.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Genoscope - CEA;
RL   Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC       pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC   -!- SIMILARITY: Belongs to the reaction center PufL/M/PsbA/D family.
CC       {ECO:0000256|ARBA:ARBA00008204}.
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DR   EMBL; LK032237; CDY29457.1; -; Genomic_DNA.
DR   EMBL; LK032237; CDY29458.1; -; Genomic_DNA.
DR   STRING; 3708.A0A078EKT7; -.
DR   PaxDb; 3708-A0A078EKT7; -.
DR   EnsemblPlants; CDX99953; CDX99953; GSBRNA2T00108811001.
DR   EnsemblPlants; CDY29457; CDY29457; GSBRNA2T00043082001.
DR   EnsemblPlants; CDY29458; CDY29458; GSBRNA2T00043092001.
DR   Gramene; CDX99953; CDX99953; GSBRNA2T00108811001.
DR   Gramene; CDY29457; CDY29457; GSBRNA2T00043082001.
DR   Gramene; CDY29458; CDY29458; GSBRNA2T00043092001.
DR   Proteomes; UP000028999; Unassembled WGS sequence.
DR   GO; GO:0009535; C:chloroplast thylakoid membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0009523; C:photosystem II; IEA:UniProtKB-KW.
DR   GO; GO:0016168; F:chlorophyll binding; IEA:UniProtKB-KW.
DR   GO; GO:0045156; F:electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; IEA:InterPro.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0009772; P:photosynthetic electron transport in photosystem II; IEA:InterPro.
DR   Gene3D; 1.10.10.670; photosystem ii from thermosynechococcus elongatus; 1.
DR   Gene3D; 1.20.85.10; Photosystem II protein D1-like; 1.
DR   HAMAP; MF_01496; PSII_PsbC_CP43; 1.
DR   InterPro; IPR036854; Photo_II_D1/D2_sf.
DR   InterPro; IPR000484; Photo_RC_L/M.
DR   InterPro; IPR000932; PS_antenna-like.
DR   InterPro; IPR036001; PS_II_antenna-like_sf.
DR   InterPro; IPR005869; PSII_PsbC.
DR   InterPro; IPR044900; PSII_PsbC_sf.
DR   NCBIfam; TIGR01153; psbC; 1.
DR   PANTHER; PTHR33149:SF12; PHOTOSYSTEM II D2 PROTEIN; 1.
DR   PANTHER; PTHR33149; PHOTOSYSTEM II PROTEIN D1; 1.
DR   Pfam; PF00124; Photo_RC; 1.
DR   Pfam; PF00421; PSII; 2.
DR   SUPFAM; SSF81483; Bacterial photosystem II reaction centre, L and M subunits; 1.
DR   SUPFAM; SSF161077; Photosystem II antenna protein-like; 1.
DR   PROSITE; PS00244; REACTION_CENTER; 1.
PE   3: Inferred from homology;
KW   Acetylation {ECO:0000256|ARBA:ARBA00022990};
KW   Chlorophyll {ECO:0000256|ARBA:ARBA00022494};
KW   Chromophore {ECO:0000256|ARBA:ARBA00022991};
KW   Electron transport {ECO:0000256|ARBA:ARBA00022982};
KW   Iron {ECO:0000256|ARBA:ARBA00023004};
KW   Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW   Manganese {ECO:0000256|ARBA:ARBA00023211};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Phosphoprotein {ECO:0000256|ARBA:ARBA00022553};
KW   Photosynthesis {ECO:0000256|ARBA:ARBA00022531};
KW   Photosystem II {ECO:0000256|ARBA:ARBA00023276};
KW   Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW   Thylakoid {ECO:0000256|ARBA:ARBA00023078};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW   ECO:0000256|SAM:Phobius}; Transport {ECO:0000256|ARBA:ARBA00022448}.
FT   TRANSMEM        28..50
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        56..74
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        86..105
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        155..180
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        240..261
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        302..327
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        348..372
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        424..444
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        465..483
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        586..604
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
SQ   SEQUENCE   634 AA;  69975 MW;  4002F6A2EC403155 CRC64;
     MTIALGKFTK DEKDLFDIMD DWLRRDRFVF VGWSGLLLFP CAYFALGGWF TGQSGWFFAP
     SFGVAAIFRF ILFFQGFHNW TLNPFHMMGV AGVLGAALLC AIHGATVENT LFEDGDGANT
     FRAFNPTQAE ETYSMVTANR FWSQIFGVAF SNKRWLHFFM LFVPVTGLWM SALGVVGLAL
     NLRAYDFVSQ EIRAAEDPEF ETFYTKNILL NEALAGRDQE TTGFAWWAGN ARLINLSGKL
     LGAHVAHAGL IVFWAGAMNL FEVAHFVPEK PMYEQGLILL PHLATLGWGV GPGGEVIDTF
     PYFVSGVLHL ISSAVLGFGG IYHALLGPET LEESFPFFGY VWKDRNKMTT ILGIHLILLG
     VGAFLLVFKA LYFGGVYDTW APGGGDVRKI TNLTLSPSVI FGYLLKSPFG GEGWIVSVDD
     LEDIIGGHVW LGSICIFGGI WHILTKPFAW ARRALVWSGE AYLSYSLAAL SVCGFIACCF
     VWFNNTAYPS EFYGPTGPEA SQAQAFTFLV RDQRLGANVG SAQGPTGLGK YLMRSPTGEV
     IFGGETMRFW DLRAPWLEPL RGPNGLDLRG VATEINAVNY VSPRSWLSTS HFVLGFFLFV
     GHLWHAGRAR AAAAGFEKGI DRDFEPVLSM TPLN
//
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