ID A0A078EKT7_BRANA Unreviewed; 634 AA.
AC A0A078EKT7;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 24-JAN-2024, entry version 36.
DE SubName: Full=BnaC05g32120D protein {ECO:0000313|EMBL:CDY29458.1};
DE SubName: Full=BnaC05g32130D protein {ECO:0000313|EMBL:CDY29457.1};
GN Name=BnaC05g32120D {ECO:0000313|EMBL:CDY29458.1};
GN Synonyms=BnaC05g32130D {ECO:0000313|EMBL:CDY29457.1};
GN ORFNames=GSBRNA2T00043082001 {ECO:0000313|EMBL:CDY29457.1},
GN GSBRNA2T00043092001 {ECO:0000313|EMBL:CDY29458.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY29458.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY29458.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY29458.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the reaction center PufL/M/PsbA/D family.
CC {ECO:0000256|ARBA:ARBA00008204}.
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DR EMBL; LK032237; CDY29457.1; -; Genomic_DNA.
DR EMBL; LK032237; CDY29458.1; -; Genomic_DNA.
DR STRING; 3708.A0A078EKT7; -.
DR PaxDb; 3708-A0A078EKT7; -.
DR EnsemblPlants; CDX99953; CDX99953; GSBRNA2T00108811001.
DR EnsemblPlants; CDY29457; CDY29457; GSBRNA2T00043082001.
DR EnsemblPlants; CDY29458; CDY29458; GSBRNA2T00043092001.
DR Gramene; CDX99953; CDX99953; GSBRNA2T00108811001.
DR Gramene; CDY29457; CDY29457; GSBRNA2T00043082001.
DR Gramene; CDY29458; CDY29458; GSBRNA2T00043092001.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0009535; C:chloroplast thylakoid membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0009523; C:photosystem II; IEA:UniProtKB-KW.
DR GO; GO:0016168; F:chlorophyll binding; IEA:UniProtKB-KW.
DR GO; GO:0045156; F:electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0009772; P:photosynthetic electron transport in photosystem II; IEA:InterPro.
DR Gene3D; 1.10.10.670; photosystem ii from thermosynechococcus elongatus; 1.
DR Gene3D; 1.20.85.10; Photosystem II protein D1-like; 1.
DR HAMAP; MF_01496; PSII_PsbC_CP43; 1.
DR InterPro; IPR036854; Photo_II_D1/D2_sf.
DR InterPro; IPR000484; Photo_RC_L/M.
DR InterPro; IPR000932; PS_antenna-like.
DR InterPro; IPR036001; PS_II_antenna-like_sf.
DR InterPro; IPR005869; PSII_PsbC.
DR InterPro; IPR044900; PSII_PsbC_sf.
DR NCBIfam; TIGR01153; psbC; 1.
DR PANTHER; PTHR33149:SF12; PHOTOSYSTEM II D2 PROTEIN; 1.
DR PANTHER; PTHR33149; PHOTOSYSTEM II PROTEIN D1; 1.
DR Pfam; PF00124; Photo_RC; 1.
DR Pfam; PF00421; PSII; 2.
DR SUPFAM; SSF81483; Bacterial photosystem II reaction centre, L and M subunits; 1.
DR SUPFAM; SSF161077; Photosystem II antenna protein-like; 1.
DR PROSITE; PS00244; REACTION_CENTER; 1.
PE 3: Inferred from homology;
KW Acetylation {ECO:0000256|ARBA:ARBA00022990};
KW Chlorophyll {ECO:0000256|ARBA:ARBA00022494};
KW Chromophore {ECO:0000256|ARBA:ARBA00022991};
KW Electron transport {ECO:0000256|ARBA:ARBA00022982};
KW Iron {ECO:0000256|ARBA:ARBA00023004};
KW Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW Manganese {ECO:0000256|ARBA:ARBA00023211};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Phosphoprotein {ECO:0000256|ARBA:ARBA00022553};
KW Photosynthesis {ECO:0000256|ARBA:ARBA00022531};
KW Photosystem II {ECO:0000256|ARBA:ARBA00023276};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Thylakoid {ECO:0000256|ARBA:ARBA00023078};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}; Transport {ECO:0000256|ARBA:ARBA00022448}.
FT TRANSMEM 28..50
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 56..74
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 86..105
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 155..180
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 240..261
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 302..327
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 348..372
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 424..444
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 465..483
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 586..604
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
SQ SEQUENCE 634 AA; 69975 MW; 4002F6A2EC403155 CRC64;
MTIALGKFTK DEKDLFDIMD DWLRRDRFVF VGWSGLLLFP CAYFALGGWF TGQSGWFFAP
SFGVAAIFRF ILFFQGFHNW TLNPFHMMGV AGVLGAALLC AIHGATVENT LFEDGDGANT
FRAFNPTQAE ETYSMVTANR FWSQIFGVAF SNKRWLHFFM LFVPVTGLWM SALGVVGLAL
NLRAYDFVSQ EIRAAEDPEF ETFYTKNILL NEALAGRDQE TTGFAWWAGN ARLINLSGKL
LGAHVAHAGL IVFWAGAMNL FEVAHFVPEK PMYEQGLILL PHLATLGWGV GPGGEVIDTF
PYFVSGVLHL ISSAVLGFGG IYHALLGPET LEESFPFFGY VWKDRNKMTT ILGIHLILLG
VGAFLLVFKA LYFGGVYDTW APGGGDVRKI TNLTLSPSVI FGYLLKSPFG GEGWIVSVDD
LEDIIGGHVW LGSICIFGGI WHILTKPFAW ARRALVWSGE AYLSYSLAAL SVCGFIACCF
VWFNNTAYPS EFYGPTGPEA SQAQAFTFLV RDQRLGANVG SAQGPTGLGK YLMRSPTGEV
IFGGETMRFW DLRAPWLEPL RGPNGLDLRG VATEINAVNY VSPRSWLSTS HFVLGFFLFV
GHLWHAGRAR AAAAGFEKGI DRDFEPVLSM TPLN
//