ID A0A078F2L0_BRANA Unreviewed; 629 AA.
AC A0A078F2L0;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF2088275.1};
DE SubName: Full=BnaA06g24790D protein {ECO:0000313|EMBL:CDY08745.1};
GN Name=BnaA06g24790D {ECO:0000313|EMBL:CDY08745.1};
GN ORFNames=DARMORV10_A06P32690.1 {ECO:0000313|EMBL:CAF2088275.1},
GN GSBRNA2T00000673001 {ECO:0000313|EMBL:CDY08745.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY08745.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY08745.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY08745.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF2088275.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; HG994360; CAF2088275.1; -; Genomic_DNA.
DR EMBL; LK031989; CDY08745.1; -; Genomic_DNA.
DR RefSeq; XP_013643317.1; XM_013787863.1.
DR STRING; 3708.A0A078F2L0; -.
DR PaxDb; 3708-A0A078F2L0; -.
DR EnsemblPlants; CDY08745; CDY08745; GSBRNA2T00000673001.
DR Gramene; CDY08745; CDY08745; GSBRNA2T00000673001.
DR OMA; FARCIVE; -.
DR OrthoDB; 449788at2759; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 7.
DR PANTHER; PTHR47934; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL; 1.
DR PANTHER; PTHR47934:SF6; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL-RELATED; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 2.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 7.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 208..238
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 242..276
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 277..311
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 312..346
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 347..381
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 417..451
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 452..486
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 609..629
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 629 AA; 72726 MW; 3CCAB4EF6531DF1D CRC64;
MLPFARCIVE IFLTKRQFAS PSSQFYSRLD IIHRSVHSSR ALESNFRRSN GTGLVCLEKR
HDDGTKTPNH DEFASDVEKA YRILRKFHSR VPKLELALNE SGVELRPGLI ERVLNRCGDA
GSLGYRFFVW AAKQRPGYRH SYQVYKSMAK IISKMRQFGA VWSLIEEMRK ENPQLIESEL
FVVLVRRFEG SEIMKKAVEV LDEMPEPDEY VFACLLDALC KSGSVKDAAK LFEDMRLRFG
PDRRYFASLL CGWCREGRMM EAKHVLVQMK EAGFEPDVAD YTNLLSGYAH ASKMADSYDV
LKDMRRRGFE PKADCYTVLI QALCKVDRME EAMSVFVEME RYECEADTVT YTELVSGFCK
SGKIDKCYSL LDDMIKKGLV PSQLTYMHIM AAYEKRENLD ECLELMEKMK MIGYHLDLDV
YNVVIRLACK LGEVKEAVRL WNEMEADGLR PEVDTFVIMI NGLTSRGCLL EACEHFKEMV
SRGLFSVPQH VTLKSLLNSV LREEKLEMAE DVWSCITSKC TCELNVSSWT IWIHALFSKG
YVKEACSYCV EMIEMDFMMQ PDTFAKLMKG LKKLYNREFA VEITEKVRSM AAEREMSFKM
YKRRGVEDLT EKAKARKDRQ GKKNKRTTP
//
