ID A0A078F316_BRANA Unreviewed; 347 AA.
AC A0A078F316;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE RecName: Full=Ninja-family protein {ECO:0000256|RuleBase:RU369029};
DE AltName: Full=ABI-binding protein {ECO:0000256|RuleBase:RU369029};
GN Name=BnaA07g24330D {ECO:0000313|EMBL:CDY07354.1};
GN ORFNames=DARMORV10_A07P31680.1 {ECO:0000313|EMBL:CAF2185665.1},
GN GSBRNA2T00124314001 {ECO:0000313|EMBL:CDY07354.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY07354.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY07354.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY07354.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF2185665.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Acts as a negative regulator of abscisic acid (ABA) response.
CC {ECO:0000256|RuleBase:RU369029}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|RuleBase:RU369029}.
CC -!- SIMILARITY: Belongs to the Ninja family.
CC {ECO:0000256|ARBA:ARBA00006081, ECO:0000256|RuleBase:RU369029}.
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DR EMBL; HG994361; CAF2185665.1; -; Genomic_DNA.
DR EMBL; LK031978; CDY07354.1; -; Genomic_DNA.
DR RefSeq; XP_013649098.1; XM_013793644.1.
DR STRING; 3708.A0A078F316; -.
DR PaxDb; 3708-A0A078F316; -.
DR EnsemblPlants; CDY07354; CDY07354; GSBRNA2T00124314001.
DR GeneID; 106353835; -.
DR Gramene; CDY07354; CDY07354; GSBRNA2T00124314001.
DR KEGG; bna:106353835; -.
DR OMA; MARSNSC; -.
DR OrthoDB; 684212at2759; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0045892; P:negative regulation of DNA-templated transcription; IBA:GO_Central.
DR GO; GO:0009737; P:response to abscisic acid; IBA:GO_Central.
DR GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR InterPro; IPR031307; Ninja_fam.
DR InterPro; IPR012463; Ninja_motif.
DR InterPro; IPR032310; NLS_NINJA_AFP-like.
DR InterPro; IPR032308; TDBD.
DR PANTHER; PTHR31413; AFP HOMOLOG 2; 1.
DR PANTHER; PTHR31413:SF50; NINJA-FAMILY PROTEIN AFP1; 1.
DR Pfam; PF07897; EAR; 1.
DR Pfam; PF16136; NLS_NINJA_AFP; 1.
DR Pfam; PF16135; TDBD; 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|RuleBase:RU369029};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999}.
FT DOMAIN 43..76
FT /note="Ethylene-responsive binding factor-associated
FT repression"
FT /evidence="ECO:0000259|Pfam:PF07897"
FT DOMAIN 304..338
FT /note="Tify"
FT /evidence="ECO:0000259|Pfam:PF16135"
FT REGION 28..47
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 85..178
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 190..259
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 141..167
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 213..258
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 347 AA; 37412 MW; B2A672DA5DE191C1 CRC64;
MAEANKTSRE IARSNSCVFP RDLLQRFISN SAEGEDGGDQ EEEDDEEIEL NLGLSLGGRF
GVDRSSKLVR SSSVVVTMPL FREPETTKPA ETSVAMARRT GLTRTTSLPA ESEEEWRKRK
EMQTLRRMAA KRRRSEKLRT GGGNSTKSTE ANNNPGEAAT TSRRRGRPSS GLPRWSATAA
NSGGLLRQHS AGHESLHGSL ESQGGGGGGG GGVGSSSSVS EMETKSNQAS SEEARSLPTT
QQQQEAIAKP NTTRLRRLSS VDMKIEPPQG KGKNEMPCVF TKGDGPNGKR VDGILYRYGN
GEEVRIMCVC HGDFLSPADF VKHAGGPHVD HPLRHIVVNT SSPSNLL
//
