ID A0A078F5N1_BRANA Unreviewed; 469 AA.
AC A0A078F5N1;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF2088317.1};
DE SubName: Full=BnaA06g24980D protein {ECO:0000313|EMBL:CDY08726.1};
GN Name=BnaA06g24980D {ECO:0000313|EMBL:CDY08726.1};
GN ORFNames=DARMORV10_A06P32870.1 {ECO:0000313|EMBL:CAF2088317.1},
GN GSBRNA2T00000651001 {ECO:0000313|EMBL:CDY08726.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY08726.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY08726.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY08726.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF2088317.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 43 family.
CC {ECO:0000256|ARBA:ARBA00009865, ECO:0000256|RuleBase:RU361187}.
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DR EMBL; HG994360; CAF2088317.1; -; Genomic_DNA.
DR EMBL; LK031989; CDY08726.1; -; Genomic_DNA.
DR STRING; 3708.A0A078F5N1; -.
DR PaxDb; 3708-A0A078F5N1; -.
DR EnsemblPlants; CDY08726; CDY08726; GSBRNA2T00000651001.
DR Gramene; CDY08726; CDY08726; GSBRNA2T00000651001.
DR OMA; NDAFHYS; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0004553; F:hydrolase activity, hydrolyzing O-glycosyl compounds; IEA:InterPro.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR CDD; cd18825; GH43_CtGH43-like; 1.
DR InterPro; IPR006710; Glyco_hydro_43.
DR InterPro; IPR023296; Glyco_hydro_beta-prop_sf.
DR PANTHER; PTHR22925:SF3; ARABINANASE_LEVANSUCRASE_INVERTASE; 1.
DR PANTHER; PTHR22925; GLYCOSYL HYDROLASE 43 FAMILY MEMBER; 1.
DR Pfam; PF04616; Glyco_hydro_43; 1.
DR SUPFAM; SSF75005; Arabinanase/levansucrase/invertase; 1.
PE 3: Inferred from homology;
KW Glycosidase {ECO:0000256|RuleBase:RU361187};
KW Hydrolase {ECO:0000256|RuleBase:RU361187};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 21..43
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT REGION 82..103
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 469 AA; 53103 MW; 341D3FF04799157C CRC64;
MPGNSASLGL LRGFSGGGCR HSLLTIVWTV VGFFLVTHLI SLYTRKDNNI DAQQQHQPPS
HHLQQLPPPA LHDLVRVEEE ILRLPPPRKR SPRTGKRRSR KPIPLAEEFL DDKSPIRHLF
FPDIKTSSFG PTKDMGNDAF HYSPGKIWLD TEGNPIQAHG GGILHDDKSN TYYWYGEYKD
GPTYHAHKKG PARVDIIGVG CYSSKDLWTW KNEGIVLGAE ETNKTHDLHR SNVLERPKVI
YNDKTGKYVM WMHIDDANYT KASVGVAISD NPTGPFEYLY SKRPHGFDSR DMTVFKDDDG
VAYLFYSSEV NSVLHIGPLR EDYLDVTPVM KRVMVGQHRE APAIFKHEST YYMITSWCTG
WAPNEALAHA AESIMGPWEK LGNPCVGGNK VFRLTTFFAQ STYVIPLPGV PGAFVFMADR
WNPADLRDSR YVWLPLVVGG PADQPLESSF GFPMWSRVSI YWHSKWHLP
//
