ID A0A078FIA2_BRANA Unreviewed; 1065 AA.
AC A0A078FIA2;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE SubName: Full=BnaC03g12590D protein {ECO:0000313|EMBL:CDY11833.1};
GN Name=BnaC03g12590D {ECO:0000313|EMBL:CDY11833.1};
GN ORFNames=GSBRNA2T00060657001 {ECO:0000313|EMBL:CDY11833.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY11833.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY11833.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the FIP1 family.
CC {ECO:0000256|ARBA:ARBA00007459}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; LK032015; CDY11833.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A078FIA2; -.
DR STRING; 3708.A0A078FIA2; -.
DR PaxDb; 3708-A0A078FIA2; -.
DR EnsemblPlants; CDY11833; CDY11833; GSBRNA2T00060657001.
DR Gramene; CDY11833; CDY11833; GSBRNA2T00060657001.
DR OMA; SSRDYHK; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0006397; P:mRNA processing; IEA:InterPro.
DR InterPro; IPR007854; Fip1_dom.
DR InterPro; IPR044976; FIPS5-like.
DR PANTHER; PTHR36884; FIP1[III]-LIKE PROTEIN; 1.
DR PANTHER; PTHR36884:SF7; PRE-MRNA POLYADENYLATION FACTOR FIP1 DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF05182; Fip1; 1.
PE 3: Inferred from homology;
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999}.
FT DOMAIN 316..358
FT /note="Pre-mRNA polyadenylation factor Fip1"
FT /evidence="ECO:0000259|Pfam:PF05182"
FT REGION 1..74
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 410..447
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 460..671
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 753..1038
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 37..63
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 471..491
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 492..573
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 591..671
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 753..886
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 887..915
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 916..958
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 969..1038
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1065 AA; 119816 MW; C0DA06E3926B0797 CRC64;
MDEDDEFGDL YSDVLPPFQP PPPPLRSIDL NLRSHEQDAA EPNSPSVARV SETTASKPST
TPSHDAIGDD KDMNFDIEEP YAADSTPAIP GLGTDREGRA IIEQVGDGGY GGRGEGDDWD
SDSEDDLQIV LNDNVMMGAD RRARLGDNED DDEEPLVIVD KNQPMEEQQL WGEEEAVDRD
GKEGGEAVKG SAAGYHPFHS QFKVRVNAPM LSLVTLLNGR GSCRGPVFIF ISPLYLYIKY
VRPGASPIPG SVASAAGQVR PPANLGPMAG RGRGDWRPMG MRNASAAQKG YHQTWGGNAA
GRGLDFTLPS HKTIFEFDID AFEEKPWRYQ GVDITDYFNF GLNEETWKDY CKHLDQHRIE
TTMKSRIRVY ESGRTDQGYD PYLPPELAAA TGAQVVPVDS SNLVKLDTAQ GDSANIRPPL
PPGRPIPVET GSVERPSSID TRAPRMRDLE AIIEIVCEDS HEDEPSGENG AEQADSGQSF
RSSSPVGDRG TRSSSVDRED VGGEAGKDYE IEEEHKMSSA VPRSAVEEDD GGGSKTERSS
ESSKARCGSH RDHQQLKDSA EEEVIQDRNH CTRPASNKKH HVNNAQHQSR KYQDIGKEME
RTRAGSKGES GEDFDKRKER DVDGGVWRRR EDDTFSRRGG DEGSRKRDRG DDHVPSRNHV
DDGGLRNNYE LDDHISKRRK VEEYVRRTRS EKNKISFGQR EESISRLKRE RGDRLDYQKR
DVQHKIRDDI YDHASLRHRD DFYMQRDGNE RLRERGDLDK LKLTHEDGLS APGRERQVAA
RGHRGSEDRS SSRMKDEYKE HLTKDTTRQT KQTKKREYPG EESSSYHRGH GDDIVSNEKK
TRLERTSAKS DKVVESLDGQ RFQDRNHKDS RRKIKEQSED TDSLRNKQGE QNGSSQVTGL
KRTNEARNYR SEIPQQHNAT KRHKENASSG DELQDSKRGR TKFERWGSHK ERDDDVTAKG
SSSTSSKIQE KESGHDLAET KDGSKKGQGD QHLDTVEKLK KRSERFKLPM PTEKANKAGV
KKMESETLPS EKIEGPADSE QECVWEELCC VRIGHKGDSE RILLY
//
