ID A0A078FIZ3_BRANA Unreviewed; 552 AA.
AC A0A078FIZ3;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF2040078.1};
DE SubName: Full=BnaA09g13370D protein {ECO:0000313|EMBL:CDY12937.1};
GN Name=BnaA09g13370D {ECO:0000313|EMBL:CDY12937.1};
GN ORFNames=DARMORV10_A09P16420.1 {ECO:0000313|EMBL:CAF2040078.1},
GN GSBRNA2T00070609001 {ECO:0000313|EMBL:CDY12937.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY12937.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY12937.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY12937.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF2040078.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; HG994363; CAF2040078.1; -; Genomic_DNA.
DR EMBL; LK032028; CDY12937.1; -; Genomic_DNA.
DR RefSeq; XP_013713768.1; XM_013858314.1.
DR SMR; A0A078FIZ3; -.
DR STRING; 3708.A0A078FIZ3; -.
DR PaxDb; 3708-A0A078FIZ3; -.
DR EnsemblPlants; CDY12937; CDY12937; GSBRNA2T00070609001.
DR GeneID; 106417496; -.
DR Gramene; CDY12937; CDY12937; GSBRNA2T00070609001.
DR KEGG; bna:106417496; -.
DR OMA; QPTEATM; -.
DR OrthoDB; 5478560at2759; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR Gene3D; 2.20.25.80; WRKY domain; 1.
DR InterPro; IPR003657; WRKY_dom.
DR InterPro; IPR036576; WRKY_dom_sf.
DR InterPro; IPR044810; WRKY_plant.
DR PANTHER; PTHR31429:SF103; WRKY DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR31429; WRKY TRANSCRIPTION FACTOR 36-RELATED; 1.
DR Pfam; PF03106; WRKY; 1.
DR SMART; SM00774; WRKY; 1.
DR SUPFAM; SSF118290; WRKY DNA-binding domain; 1.
DR PROSITE; PS50811; WRKY; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999}.
FT DOMAIN 312..378
FT /note="WRKY"
FT /evidence="ECO:0000259|PROSITE:PS50811"
FT REGION 61..88
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 206..307
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 152..186
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 63..88
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 258..279
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 280..302
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 552 AA; 60597 MW; D1A7E1D8AC4F7E84 CRC64;
MDRGWSGLTL DSSSLDLINP NRFKNNNHRR FLNPLTMSRM GDEDDQKTNM SIDGSEFRFP
VSLSGIRDRE DDDSSSGVGR ENDREVPGEV DFFSDKKSRV CQDEVDDAGL RVKKEEQDDR
TDVNTGLNLR TTVNARSDQS VIDNGESSEM EDKRANNELV KLQDELKKMT MENEKLRELL
TQVSNNYTSL HMHLVSLMQQ QQQQQNKALE AAGKHEETIV PRQFIDLGPS RASDEAEDLS
NSSSEDRTRS GGCSAVERRN NEVRDGKRLG REESPETESN KVQKVNNSSP PTFEQSTEAT
MRKARVSVRA RSEATMISDG CQWRKYGQKM AKGNPCPRAY YRCTMATGCP VRKQVQRCAE
DRSILITTYE GNHNHPLPPA AVAMASTTMA AANMLLSGSM SSHDGMMNPT NLLARAVLPC
STSMATISAS APFPTVTLDL THAPPLPNGS SPSTAAATNN HNSLMLRPQQ QMTNLPPNML
PHVIGQALYN QSKFSGLQFS SGSPSAAQSH AVADTISALT ADPNFTAALA SVISSMINGS
NHHDGEGNNK NQ
//
