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Database: UniProt
Entry: A0A078FKF3_BRANA
LinkDB: A0A078FKF3_BRANA
Original site: A0A078FKF3_BRANA 
ID   A0A078FKF3_BRANA        Unreviewed;       436 AA.
AC   A0A078FKF3;
DT   29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT   29-OCT-2014, sequence version 1.
DT   24-JAN-2024, entry version 31.
DE   SubName: Full=BnaA02g12960D protein {ECO:0000313|EMBL:CDY12628.1};
GN   Name=BnaA02g12960D {ECO:0000313|EMBL:CDY12628.1};
GN   ORFNames=GSBRNA2T00070133001 {ECO:0000313|EMBL:CDY12628.1};
OS   Brassica napus (Rape).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX   NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY12628.1, ECO:0000313|Proteomes:UP000028999};
RN   [1] {ECO:0000313|EMBL:CDY12628.1, ECO:0000313|Proteomes:UP000028999}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX   PubMed=25146293; DOI=10.1126/science.1253435;
RA   Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA   Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA   Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA   Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA   Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA   Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA   Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA   Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA   Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA   Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA   Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA   Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA   Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT   "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT   Brassica napus oilseed genome.";
RL   Science 345:950-953(2014).
CC   -!- SUBCELLULAR LOCATION: Nucleus, nucleoplasm
CC       {ECO:0000256|ARBA:ARBA00004642}.
CC   -!- SIMILARITY: Belongs to the ZCCHC8 family.
CC       {ECO:0000256|ARBA:ARBA00007497}.
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DR   EMBL; LK032025; CDY12628.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A078FKF3; -.
DR   STRING; 3708.A0A078FKF3; -.
DR   PaxDb; 3708-A0A078FKF3; -.
DR   EnsemblPlants; CDY12628; CDY12628; GSBRNA2T00070133001.
DR   Gramene; CDY12628; CDY12628; GSBRNA2T00070133001.
DR   OMA; NDERMKN; -.
DR   Proteomes; UP000028999; Unassembled WGS sequence.
DR   GO; GO:0071013; C:catalytic step 2 spliceosome; IBA:GO_Central.
DR   GO; GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0034470; P:ncRNA processing; IBA:GO_Central.
DR   InterPro; IPR006568; PSP_pro-rich.
DR   InterPro; IPR001878; Znf_CCHC.
DR   InterPro; IPR036875; Znf_CCHC_sf.
DR   PANTHER; PTHR13316:SF9; CCHC-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR13316; ZINC FINGER, CCHC DOMAIN CONTAINING 8; 1.
DR   Pfam; PF04046; PSP; 1.
DR   SMART; SM00581; PSP; 1.
DR   SMART; SM00343; ZnF_C2HC; 1.
DR   SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR   PROSITE; PS50158; ZF_CCHC; 1.
PE   3: Inferred from homology;
KW   Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW   Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW   Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW   Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT   DOMAIN          205..221
FT                   /note="CCHC-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50158"
FT   REGION          1..35
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   436 AA;  48816 MW;  19CA5CC134F2F0B3 CRC64;
     MAADSSFSGL EGQRDEHNSD MEEDMDLTED DFRNVSGQFS RDTSIAEVKD AVTVSAETVK
     VDVSSKSGVK RARTISEENQ PSVHVTYTHL TRASKQKLES LLQQWSEWEA EQTSLLCQSD
     QDQEPALESG EDTYFPALRV GLQKTSSVSF WFDCKTGQDS LKEFVPVESS TTPLYNRKFA
     IGLDSTVGSS NVEGGLEIID DDPPRCFNCG AYSHSMRECP KPFDRSAVSI ARRQHKSKRN
     QSSRLIPSRY YKSAQGGKYD GLKPGSLDPE TRQVLGLGEL DPPPWLHRMR EIGYPPGYLA
     VEEDHLSGIT IFDEEETEPP EEGEVKAEDG EILEVAASSS EPPQMKMTVE FPGINAPIPE
     NADVWLWQQR KNTGHGYNHD QHYRGVMGPP GVELSSSYPP RYGGIRYDHG FGSIARSPGS
     ESERRYYYSQ YDQNLR
//
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