ID A0A078FKF3_BRANA Unreviewed; 436 AA.
AC A0A078FKF3;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 24-JAN-2024, entry version 31.
DE SubName: Full=BnaA02g12960D protein {ECO:0000313|EMBL:CDY12628.1};
GN Name=BnaA02g12960D {ECO:0000313|EMBL:CDY12628.1};
GN ORFNames=GSBRNA2T00070133001 {ECO:0000313|EMBL:CDY12628.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY12628.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY12628.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleoplasm
CC {ECO:0000256|ARBA:ARBA00004642}.
CC -!- SIMILARITY: Belongs to the ZCCHC8 family.
CC {ECO:0000256|ARBA:ARBA00007497}.
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DR EMBL; LK032025; CDY12628.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A078FKF3; -.
DR STRING; 3708.A0A078FKF3; -.
DR PaxDb; 3708-A0A078FKF3; -.
DR EnsemblPlants; CDY12628; CDY12628; GSBRNA2T00070133001.
DR Gramene; CDY12628; CDY12628; GSBRNA2T00070133001.
DR OMA; NDERMKN; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0071013; C:catalytic step 2 spliceosome; IBA:GO_Central.
DR GO; GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0034470; P:ncRNA processing; IBA:GO_Central.
DR InterPro; IPR006568; PSP_pro-rich.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR PANTHER; PTHR13316:SF9; CCHC-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR13316; ZINC FINGER, CCHC DOMAIN CONTAINING 8; 1.
DR Pfam; PF04046; PSP; 1.
DR SMART; SM00581; PSP; 1.
DR SMART; SM00343; ZnF_C2HC; 1.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 205..221
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT REGION 1..35
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 436 AA; 48816 MW; 19CA5CC134F2F0B3 CRC64;
MAADSSFSGL EGQRDEHNSD MEEDMDLTED DFRNVSGQFS RDTSIAEVKD AVTVSAETVK
VDVSSKSGVK RARTISEENQ PSVHVTYTHL TRASKQKLES LLQQWSEWEA EQTSLLCQSD
QDQEPALESG EDTYFPALRV GLQKTSSVSF WFDCKTGQDS LKEFVPVESS TTPLYNRKFA
IGLDSTVGSS NVEGGLEIID DDPPRCFNCG AYSHSMRECP KPFDRSAVSI ARRQHKSKRN
QSSRLIPSRY YKSAQGGKYD GLKPGSLDPE TRQVLGLGEL DPPPWLHRMR EIGYPPGYLA
VEEDHLSGIT IFDEEETEPP EEGEVKAEDG EILEVAASSS EPPQMKMTVE FPGINAPIPE
NADVWLWQQR KNTGHGYNHD QHYRGVMGPP GVELSSSYPP RYGGIRYDHG FGSIARSPGS
ESERRYYYSQ YDQNLR
//