ID A0A078FXR9_BRANA Unreviewed; 516 AA.
AC A0A078FXR9;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE SubName: Full=BnaC05g13960D protein {ECO:0000313|EMBL:CDY19195.1};
GN Name=BnaC05g13960D {ECO:0000313|EMBL:CDY19195.1};
GN ORFNames=GSBRNA2T00006491001 {ECO:0000313|EMBL:CDY19195.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY19195.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY19195.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
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DR EMBL; LK032093; CDY19195.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A078FXR9; -.
DR STRING; 3708.A0A078FXR9; -.
DR PaxDb; 3708-A0A078FXR9; -.
DR EnsemblPlants; CDY19195; CDY19195; GSBRNA2T00006491001.
DR Gramene; CDY19195; CDY19195; GSBRNA2T00006491001.
DR OMA; ENIEMTR; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0031985; C:Golgi cisterna; IBA:GO_Central.
DR GO; GO:0000139; C:Golgi membrane; IBA:GO_Central.
DR GO; GO:0007030; P:Golgi organization; IBA:GO_Central.
DR GO; GO:0000301; P:retrograde transport, vesicle recycling within Golgi; IBA:GO_Central.
DR InterPro; IPR019177; Golgin_subfamily_A_member_5.
DR PANTHER; PTHR13815:SF5; GOLGIN CANDIDATE 2; 1.
DR PANTHER; PTHR13815; GOLGIN-84; 1.
DR Pfam; PF09787; Golgin_A5; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Golgi apparatus {ECO:0000256|ARBA:ARBA00023034};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 444..462
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 468..488
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT REGION 24..176
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 181..293
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 331..386
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 24..41
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 64..88
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 97..138
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 516 AA; 57424 MW; 80AE4550FC91DD83 CRC64;
MANWISSKLK AAETILQQID QQAAESLRKD DKPETHEEVF ETSSKSSSPV SLKDQLRKKT
YDGSDSGGGS QRNSTEQKPS YLSSSKNLRK SDQSREKTTS SPLQSLKQEK PTTLTDADWT
ELLSAPSNQG TSTPKPRTPR GASVIRGLKK DVKRQGNGGK SPSVSDAKRS EKTSTKAVAV
IKERENMVAR LEGEKESLEK VVEERAKQQA QEAAELQTNM METLEAADLE KQKHNNTRME
VFSRLAGLEA ANAELTRSLA AGQKKLEAQI DQVAVLREQV ELKESALEGL KRKTSNIRGS
GNLVNKLDAS RGDMFEHQML EAEISLLTDK IGWLQDKANK LEADINTMRK ELEEPTEVEI
ELKRRLDQLT DHLIQKQSQV EALSSEKATI SFRIEAVSRL IEENKGMSAT EASSQDLEAG
EWKLSGSKFK PAFQDKIRSG KRHLGWLVMQ LNAIFVSGTV FLRRNPTAKV WALVYLVCLH
LWVLYILLSH SSDSSSSELR SGAVISLENF NNSSLQ
//
