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Database: UniProt
Entry: A0A078G4B1_BRANA
LinkDB: A0A078G4B1_BRANA
Original site: A0A078G4B1_BRANA 
ID   A0A078G4B1_BRANA        Unreviewed;       588 AA.
AC   A0A078G4B1;
DT   29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT   29-OCT-2014, sequence version 1.
DT   24-JAN-2024, entry version 38.
DE   SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF1757561.1};
DE   SubName: Full=BnaC09g30030D protein {ECO:0000313|EMBL:CDY20236.1};
GN   Name=BnaC09g30030D {ECO:0000313|EMBL:CDY20236.1};
GN   ORFNames=DARMORV10_C09P43590.1 {ECO:0000313|EMBL:CAF1757561.1},
GN   GSBRNA2T00010171001 {ECO:0000313|EMBL:CDY20236.1};
OS   Brassica napus (Rape).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX   NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY20236.1, ECO:0000313|Proteomes:UP000028999};
RN   [1] {ECO:0000313|EMBL:CDY20236.1, ECO:0000313|Proteomes:UP000028999}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX   PubMed=25146293; DOI=10.1126/science.1253435;
RA   Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA   Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA   Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA   Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA   Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA   Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA   Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA   Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA   Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA   Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA   Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA   Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA   Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT   "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT   Brassica napus oilseed genome.";
RL   Science 345:950-953(2014).
RN   [2] {ECO:0000313|EMBL:CDY20236.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Genoscope - CEA;
RL   Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:CAF1757561.1}
RP   NUCLEOTIDE SEQUENCE.
RG   Genoscope - CEA;
RA   William W.;
RL   Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; HG994373; CAF1757561.1; -; Genomic_DNA.
DR   EMBL; LK032104; CDY20236.1; -; Genomic_DNA.
DR   STRING; 3708.A0A078G4B1; -.
DR   PaxDb; 3708-A0A078G4B1; -.
DR   EnsemblPlants; CDY20236; CDY20236; GSBRNA2T00010171001.
DR   Gramene; CDY20236; CDY20236; GSBRNA2T00010171001.
DR   OMA; EDAYMMS; -.
DR   Proteomes; UP000028999; Unassembled WGS sequence.
DR   GO; GO:0005759; C:mitochondrial matrix; IBA:GO_Central.
DR   GO; GO:0005524; F:ATP binding; IBA:GO_Central.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IBA:GO_Central.
DR   GO; GO:0140662; F:ATP-dependent protein folding chaperone; IEA:InterPro.
DR   GO; GO:0051082; F:unfolded protein binding; IEA:InterPro.
DR   GO; GO:0051603; P:proteolysis involved in protein catabolic process; IBA:GO_Central.
DR   CDD; cd19497; RecA-like_ClpX; 1.
DR   Gene3D; 1.10.8.60; -; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR003959; ATPase_AAA_core.
DR   InterPro; IPR019489; Clp_ATPase_C.
DR   InterPro; IPR004487; Clp_protease_ATP-bd_su_ClpX.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   NCBIfam; TIGR00382; clpX; 1.
DR   PANTHER; PTHR48102; ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED; 1.
DR   PANTHER; PTHR48102:SF4; CLP PROTEASE REGULATORY SUBUNIT CLPX2, MITOCHONDRIAL; 1.
DR   Pfam; PF07724; AAA_2; 1.
DR   Pfam; PF10431; ClpB_D2-small; 1.
DR   SMART; SM00382; AAA; 1.
DR   SMART; SM01086; ClpB_D2-small; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000028999}.
FT   DOMAIN          241..374
FT                   /note="AAA+ ATPase"
FT                   /evidence="ECO:0000259|SMART:SM00382"
FT   DOMAIN          454..546
FT                   /note="Clp ATPase C-terminal"
FT                   /evidence="ECO:0000259|SMART:SM01086"
FT   REGION          136..172
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          547..588
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        562..588
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   588 AA;  64292 MW;  5D6175AFC747CA63 CRC64;
     MLCSLSISRF LSRKTSLVSR SFRLIISADD TLHRIPLQPP TSNTTLTTPF PFFSSRRSIY
     DSSGGDYDYI RSDVNCPRCS AHMLVVFSNR PLSLTAREPG IYQAVNFCPQ CKSAFYFRPF
     KLSPLQGSFI ELGKVKKGAD GDDDDDDDDG DDRSWKIQGL KNEDDANSSN GLVKLPTPKE
     ICQGLDQFVI GQDKAKKVLS VAVYNHYKRI YHASKLKGSG SESVNLVMED DDDSIDLVEL
     DKSNVLLLGP TGSGKTLLAK TLARIVSVPF AIADATSLTQ ASYVGEDVES ILYKLYVEAG
     CNVEEAQRGI VYIDEVDKMS MKSHSSNGGR DVSGEGVQQS LLKLLEGTVV SVPIPEKGLR
     RDPRGDSIQM DTKDILFICG GAFVDLEKTV SERQHDASIG FGASVRTNMN TSGFSSSAVT
     SSLLESLQSE DLVAYGLIPE FVGRLPIFVS LSALNEDQLV QVLTEPRSAL GKQYKKLFRM
     NNVQLHFTEG ATRLIARKAM SKNTGARGLR SILESILTEA MFEVPDGKSE GSQSIKAVLV
     DEEAVGSVGS PGCGAKILRG DDVPQQHFEQ TESNEKRKED ETKRAQSL
//
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