ID A0A078G5K1_BRANA Unreviewed; 206 AA.
AC A0A078G5K1;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 24-JAN-2024, entry version 30.
DE SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF2108122.1};
DE SubName: Full=BnaC08g14290D protein {ECO:0000313|EMBL:CDY20629.1};
GN Name=BnaC08g14290D {ECO:0000313|EMBL:CDY20629.1};
GN ORFNames=DARMORV10_C08P13710.1 {ECO:0000313|EMBL:CAF2108122.1},
GN GSBRNA2T00012809001 {ECO:0000313|EMBL:CDY20629.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY20629.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY20629.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY20629.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF2108122.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; HG994372; CAF2108122.1; -; Genomic_DNA.
DR EMBL; LK032110; CDY20629.1; -; Genomic_DNA.
DR RefSeq; XP_013750790.1; XM_013895336.1.
DR STRING; 3708.A0A078G5K1; -.
DR PaxDb; 3708-A0A078G5K1; -.
DR EnsemblPlants; CDY20629; CDY20629; GSBRNA2T00012809001.
DR GeneID; 106453099; -.
DR Gramene; CDY20629; CDY20629; GSBRNA2T00012809001.
DR KEGG; bna:106453099; -.
DR OMA; TSFQRQY; -.
DR OrthoDB; 418949at2759; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IBA:GO_Central.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IBA:GO_Central.
DR GO; GO:0009736; P:cytokinin-activated signaling pathway; IBA:GO_Central.
DR GO; GO:0009740; P:gibberellic acid mediated signaling pathway; IBA:GO_Central.
DR GO; GO:0010026; P:trichome differentiation; IBA:GO_Central.
DR GO; GO:0010090; P:trichome morphogenesis; IEA:InterPro.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR InterPro; IPR044299; GIS3/ZFP5/ZFP6.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR46353:SF15; C2H2-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR46353; ZINC FINGER PROTEIN 5; 1.
DR Pfam; PF13912; zf-C2H2_6; 1.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00042}.
FT DOMAIN 55..82
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
SQ SEQUENCE 206 AA; 22928 MW; 92D804001E69C92F CRC64;
MSRTCESSSG SSSDKTIKLF GFELISGGNR SPEVTTADSV SSSTKNTTSF IAKRLECQYC
GKEFANSQAL GGHQNAHKKE RLKKKRLQLQ ARRASIGYYL TSHHQPMTTS FQRPYKTPSY
CAFSSMHVNN QMGVFNDEWS PISSQISFGN KDTSQDIIEQ NGEMGKVYGG VRQNMIQFQR
DLTSRSDSKR SIKSLDLHLG MAGDTV
//
