ID A0A078GB01_BRANA Unreviewed; 1853 AA.
AC A0A078GB01;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE SubName: Full=BnaC03g23460D protein {ECO:0000313|EMBL:CDY22536.1};
GN Name=BnaC03g23460D {ECO:0000313|EMBL:CDY22536.1};
GN ORFNames=GSBRNA2T00019127001 {ECO:0000313|EMBL:CDY22536.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY22536.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY22536.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the ABC transporter superfamily. ABCA family.
CC CPR flippase (TC 3.A.1.211) subfamily. {ECO:0000256|ARBA:ARBA00008526}.
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DR EMBL; LK032132; CDY22536.1; -; Genomic_DNA.
DR SMR; A0A078GB01; -.
DR STRING; 3708.A0A078GB01; -.
DR PaxDb; 3708-A0A078GB01; -.
DR EnsemblPlants; CDY22536; CDY22536; GSBRNA2T00019127001.
DR Gramene; CDY22536; CDY22536; GSBRNA2T00019127001.
DR OMA; WKNWIVL; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0140359; F:ABC-type transporter activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0042626; F:ATPase-coupled transmembrane transporter activity; IBA:GO_Central.
DR GO; GO:0005319; F:lipid transporter activity; IBA:GO_Central.
DR GO; GO:0006869; P:lipid transport; IBA:GO_Central.
DR CDD; cd03263; ABC_subfamily_A; 2.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR013525; ABC2_TM.
DR InterPro; IPR003439; ABC_transporter-like_ATP-bd.
DR InterPro; IPR017871; ABC_transporter-like_CS.
DR InterPro; IPR026082; ABCA.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR19229:SF263; ABC TRANSPORTER A FAMILY MEMBER 1; 1.
DR PANTHER; PTHR19229; ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA; 1.
DR Pfam; PF12698; ABC2_membrane_3; 1.
DR Pfam; PF00005; ABC_tran; 2.
DR SMART; SM00382; AAA; 2.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS00211; ABC_TRANSPORTER_1; 2.
DR PROSITE; PS50893; ABC_TRANSPORTER_2; 2.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 24..43
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 281..299
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 319..336
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 343..374
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 386..408
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 429..452
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 903..930
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 951..972
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 1146..1169
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 1190..1215
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 1227..1249
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 1261..1283
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 1327..1350
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 520..753
FT /note="ABC transporter"
FT /evidence="ECO:0000259|PROSITE:PS50893"
FT DOMAIN 1424..1662
FT /note="ABC transporter"
FT /evidence="ECO:0000259|PROSITE:PS50893"
SQ SEQUENCE 1853 AA; 205529 MW; 29E871D97A89FB6E CRC64;
MGTWRRQLKA MLRKNWLLKT RHPFVTAAEI LLPTVVMLLL IAVRTRVDTT IHPARSNIEK
DTVVQVGEGI SPSFPQVLEL LIADGEYLAF APDTDETNNM IDILSLNFPD LRLVTRIFKD
DIELETYITS AHYAVCSDVR NCSNPKLNGA VVFHEQGPHV YDYSIRLNHT WALAGFPNVK
SIMDTNGPYI NDLEMGINTI PTMQYSFSGF LTLQQVVDSF IIFASQQNID LPSSHASLGS
ALSLEMPWTM FSPSKIRMVP FPTREYTDDE FQSIVKSVMG LLYLLGFLFP ISRLISYSAF
EKEQKIREGL YMMGLKDEIF HLSWFITYAL QAVRIVRWDY YSFAIMLSFL ISTFFTRAKT
AVAVGTLAFL GAFFPYYTVN DESVSMVLKV VASLLSPTAF ALGSINFADY ERAHVGLRWS
NIWLASSGVS FFVCLLMMLL DSILYCAIGL YLDKVLPREN GVRYPWNFIF NKCFGRKKNN
QYCIPGLNTN IEGTQGEPFD PVIESISLEM RQQELDGRCI QIKNLHKVFA SGRGNCCAVN
SLRLTLYENQ ILSLLGHNGA GKSTTISMLV GLLPPTSGDA LILGNSIVSN MDEIRKELGV
CPQHDILFPE LTVREHLEMF AVLKGVKEDS LKSTVTDMAE EVGLSDKIST LVRALSGGMK
RKLSLGIALI GNSKVIILDE PTSGMDPYSM RLTWQLIKKI KKGRIILLTT HSMDEAEELG
DRIGIMANGS LKCCGSSMFL KHHYGVGYTL TLVKTSPAVS VAANIVHRHI PSATCVSEVG
NEISFKLPLA SLPCFENMFR EVESCMKSSV DRSRISEIED SDYPGIQSYG ISVTTLEEVF
LRVAGCNLDI EDKQEDTFAS PDTEASLVCI ESVQKSTSQP KLLASCNEGV GVIITSIAKA
CRLIVAAVWA FIGFISMQCC GCSVISRSMF WRHCKALFIK RARSAFRDRK TVAFQLIIPA
VFLLFGLLLL QLKPHPDQKS ITLTTAYFNP LLSGYGGGGP IPFDLSQPIA KEVAEYIEGG
WIQPLRNSSY KFPNPKEALA DAIDAAGPTL GPTLLSMSEF LMSSFDQSYE SRYGAVLMDS
QHPDGSVGYT VLHNSTCQHA GPIYINVMHS ALLRLASGNK NMTIQTRNHP LPPTKSQRLQ
RHDLDAFSAA IIVSIAFSFI PASFAVPIVK EREVKAKHQQ LISGVSVLSY WLSTYVWDFV
SFLFPSTFAV ILFYAFGLEQ FIGIGRFLPT FLMLLEYGLA IASSTYCLTF FFTEHSMAQN
VILMVHFFSG LILMVISFVM GLIPATVNAN SYLKTFFRLS PGFCFSDGLA SLALLRQGMK
DKSSHGVFDW NVTGASISYL ALESIFYFLL TLGLEVLPVQ KVMSFSIGEW WQNFKGFKQG
AGSSSTEPLL KDSTGAISAD MEDDIDVQEE RDRVISGLTD NTIFYLQNLR KVYPGSNHHV
PKVAVQSLTF SVQAGECFGF LGTNGAGKTT TLSMLSGEET PTSGTAFVFG KDIVASPKVI
RQHIGYCPQF DALFDYLTVK EHLELYARIK GVVDYRIDNV VMEKLVEFDL LKHSHKPSFT
LSGGNKRKLS VAIAMIGDPP IVILDEPSTG MDPVAKRFMW DVISRLSTRS GKTAVILTTH
SMNEAQALCT RIGIMVGGRL RCIGSPQHLK TRFGNHLELE VKPNEVSHVD LENLCQMIQQ
WMFNVPSQPR SLLGDLEVCI GVSDSITPDT ASASEISLSP DMIQSIAKYL GNEQRVSALV
PPMPEEDVGF DEQLSEQLFR DGGIPLPIFA EWWLTKEKFS ALDSFIQSSF PGATFKSCNG
LIIKYQLPFG EGGLSLADAF GHLERNRNRL GIAEYSISQS TLETIFNHFA ANS
//
