ID A0A078GIY5_BRANA Unreviewed; 826 AA.
AC A0A078GIY5;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF2100055.1};
DE SubName: Full=BnaA05g19330D protein {ECO:0000313|EMBL:CDY25351.1};
GN Name=BnaA05g19330D {ECO:0000313|EMBL:CDY25351.1};
GN ORFNames=DARMORV10_A05P29280.1 {ECO:0000313|EMBL:CAF2100055.1},
GN GSBRNA2T00029470001 {ECO:0000313|EMBL:CDY25351.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY25351.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY25351.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY25351.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF2100055.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; HG994359; CAF2100055.1; -; Genomic_DNA.
DR EMBL; LK032174; CDY25351.1; -; Genomic_DNA.
DR STRING; 3708.A0A078GIY5; -.
DR PaxDb; 3708-A0A078GIY5; -.
DR EnsemblPlants; CDY25351; CDY25351; GSBRNA2T00029470001.
DR Gramene; CDY25351; CDY25351; GSBRNA2T00029470001.
DR OMA; MLRENSF; -.
DR OrthoDB; 2882240at2759; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0070063; F:RNA polymerase binding; IBA:GO_Central.
DR GO; GO:0003712; F:transcription coregulator activity; IBA:GO_Central.
DR CDD; cd00201; WW; 2.
DR Gene3D; 2.20.70.10; -; 2.
DR Gene3D; 1.10.10.440; FF domain; 5.
DR InterPro; IPR002713; FF_domain.
DR InterPro; IPR036517; FF_domain_sf.
DR InterPro; IPR045148; TCRG1-like.
DR InterPro; IPR001202; WW_dom.
DR InterPro; IPR036020; WW_dom_sf.
DR PANTHER; PTHR15377; TRANSCRIPTION ELONGATION REGULATOR 1; 1.
DR PANTHER; PTHR15377:SF3; WW DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01846; FF; 4.
DR Pfam; PF00397; WW; 2.
DR SMART; SM00441; FF; 4.
DR SMART; SM00456; WW; 2.
DR SUPFAM; SSF81698; FF domain; 5.
DR SUPFAM; SSF51045; WW domain; 2.
DR PROSITE; PS51676; FF; 4.
DR PROSITE; PS01159; WW_DOMAIN_1; 2.
DR PROSITE; PS50020; WW_DOMAIN_2; 2.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999}.
FT DOMAIN 239..266
FT /note="WW"
FT /evidence="ECO:0000259|PROSITE:PS50020"
FT DOMAIN 291..318
FT /note="WW"
FT /evidence="ECO:0000259|PROSITE:PS50020"
FT DOMAIN 446..500
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 510..568
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 581..634
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 681..738
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT REGION 1..67
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 326..361
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 386..446
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 703..724
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 651..682
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 9..24
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 31..67
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 332..357
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 389..408
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 826 AA; 91830 MW; D6AC966973F97279 CRC64;
MEGENVTEPL NTAAPSTGES IFATAPPPSD SVLATAASSI SPSSKSQPEQ SSMSIATTAQ
LSANAAASSI ANPIPQASHM LQNPPFGRPG TLAPPGLMTS PPAFPGSNPF STIPRPGGPA
QINPGVHPHM YPPYHSLPPM HGTPQGMWLQ PPPMGGIPRA HFPSHPTPFP GNYPFPVRGA
SSHLPYPGSQ PLPVGNAGTV HALPGHQPLD VPPGQKPETL SGIDDRAGSQ LVGNRVDAWT
AHKSETGVVY YYNSVTGQST YEKPPGFERE PDKVPVQPIP ISMENIHGTD WALVSTNDGK
KYYYNNKTKV SSWQIPPEVK DLVKKTEERS TESLASVPSA DLTEKGSEQS SLSAPAINNG
GRDAVSLRTT IVPGFSALDL VKKKLHDSGV PVSSTTTSEA NGGKANEVTP SGESGDGMGK
VKDAPGGGDL SDSTSDSEDE DSGPSKEECI KQFKEMLKER GVAPFSKWEK ELPKIIFDPR
FKAIQSHSVR RSLFEQYVKT RAEEERREKR AAHKAAVEGF KQLLDEASKD IDKHTDYHTF
KKKWGNDLRF ESLERKEREA LLNERILSLK RAADQKAQEI RAAAASDFKT MLHEREVSIN
SHWSKVKDSL RNDPRYRSAA HEDREVFYNE YIAELKAARG DEYEMKSRGE EDKLRERERE
LRKRKEREVL EVERVRQKIR RKEAVASYQA LLVEKIRDPE ASWTESKPKL ERDPQKRALN
PDLDPADKEK LFRDHIKTLY ERCARDFKAL LVEVLSSEAA SQQTEEAKTV LNSWSTAKQV
LKSDIRYSKM PRDDREVIWR RYAEDILRKQ KQDSPQKEDK PRDYKI
//
