ID A0A078GLQ8_BRANA Unreviewed; 373 AA.
AC A0A078GLQ8;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE SubName: Full=BnaC06g10940D protein {ECO:0000313|EMBL:CDY26102.1};
GN Name=BnaC06g10940D {ECO:0000313|EMBL:CDY26102.1};
GN ORFNames=GSBRNA2T00034730001 {ECO:0000313|EMBL:CDY26102.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY26102.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY26102.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
CC -!- SIMILARITY: Belongs to the KIN17 family.
CC {ECO:0000256|ARBA:ARBA00008517}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; LK032185; CDY26102.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A078GLQ8; -.
DR STRING; 3708.A0A078GLQ8; -.
DR PaxDb; 3708-A0A078GLQ8; -.
DR EnsemblPlants; CDY26102; CDY26102; GSBRNA2T00034730001.
DR Gramene; CDY26102; CDY26102; GSBRNA2T00034730001.
DR OMA; DRRHVHM; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003690; F:double-stranded DNA binding; IBA:GO_Central.
DR GO; GO:0006974; P:DNA damage response; IBA:GO_Central.
DR GO; GO:0006260; P:DNA replication; IBA:GO_Central.
DR CDD; cd13155; KOW_KIN17; 1.
DR Gene3D; 2.30.30.140; -; 1.
DR Gene3D; 2.30.30.30; -; 1.
DR Gene3D; 1.10.10.2030; DNA/RNA-binding protein Kin17, conserved domain; 1.
DR InterPro; IPR019447; DNA/RNA-bd_Kin17_WH-like_dom.
DR InterPro; IPR037321; KIN17-like.
DR InterPro; IPR038254; KIN17_WH-like_sf.
DR InterPro; IPR041330; KN17_SH3.
DR InterPro; IPR041995; KOW_KIN17.
DR InterPro; IPR014722; Rib_uL2_dom2.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR PANTHER; PTHR12805:SF4; DNA_RNA-BINDING PROTEIN KIN17 WH-LIKE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR12805; KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG; 1.
DR Pfam; PF10357; Kin17_mid; 1.
DR Pfam; PF18131; KN17_SH3; 1.
DR SMART; SM01253; Kin17_mid; 1.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999}.
FT DOMAIN 52..178
FT /note="DNA/RNA-binding protein Kin17 WH-like"
FT /evidence="ECO:0000259|SMART:SM01253"
FT REGION 215..261
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 156..183
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 225..261
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 373 AA; 43240 MW; 43AB93964D5EB4F1 CRC64;
MGKNDFLTPK AMANRMKAKG LQKLRWYCQM CQKQCRDENG FKCHCMSESH QRQMQVFGQN
PTRVVEGYSE EFETTFLDLM RRSHRFSRIA ATVVYNEYIN DRHHVHMNST EWATLTEFIK
YLGKTGKCKV EETPKGWFIT YIDRDSETLF KERLKNKRVK SDLAEEEKQE REIQRQIERA
SEMFNAGDEK KYEDLSLKSG VKVGFSLGGG IKQAVTTGGQ ARGESSKHMF EDEDDERGEK
RKRSGGDSER RSALDELMRE EEKKKERMNR KAYWLFQGIT QKGVVREVID NYVGEIEMLD
SKHVLRVDQE ELETVLPQIG GLVKIVNGAY RGSNAKLLGV DTDKFCAKVQ IEKGVYEGRV
IKSIEYEDIC KLA
//
