ID A0A078GP33_BRANA Unreviewed; 973 AA.
AC A0A078GP33;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 24-JAN-2024, entry version 42.
DE SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF1783484.1};
DE SubName: Full=BnaC09g42450D protein {ECO:0000313|EMBL:CDY26423.1};
GN Name=BnaC09g42450D {ECO:0000313|EMBL:CDY26423.1};
GN ORFNames=DARMORV10_C09P61700.1 {ECO:0000313|EMBL:CAF1783484.1},
GN GSBRNA2T00035213001 {ECO:0000313|EMBL:CDY26423.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY26423.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY26423.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY26423.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF1783484.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC {ECO:0000256|ARBA:ARBA00008675, ECO:0000256|RuleBase:RU004432}.
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DR EMBL; HG994373; CAF1783484.1; -; Genomic_DNA.
DR EMBL; LK032190; CDY26423.1; -; Genomic_DNA.
DR RefSeq; XP_013720900.1; XM_013865446.1.
DR RefSeq; XP_013720908.1; XM_013865454.1.
DR STRING; 3708.A0A078GP33; -.
DR PaxDb; 3708-A0A078GP33; -.
DR EnsemblPlants; CDY26423; CDY26423; GSBRNA2T00035213001.
DR GeneID; 106424692; -.
DR Gramene; CDY26423; CDY26423; GSBRNA2T00035213001.
DR KEGG; bna:106424692; -.
DR OrthoDB; 35211at2759; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IBA:GO_Central.
DR GO; GO:0034605; P:cellular response to heat; IBA:GO_Central.
DR GO; GO:0042026; P:protein refolding; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR017730; Chaperonin_ClpB.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR018368; ClpA/B_CS1.
DR InterPro; IPR028299; ClpA/B_CS2.
DR InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR InterPro; IPR027417; P-loop_NTPase.
DR NCBIfam; TIGR03346; chaperone_ClpB; 1.
DR PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR PANTHER; PTHR11638:SF186; BNAC09G42450D PROTEIN; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF17871; AAA_lid_9; 1.
DR Pfam; PF02861; Clp_N; 2.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF81923; Double Clp-N motif; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51903; CLP_R; 1.
DR PROSITE; PS00870; CLPAB_1; 1.
DR PROSITE; PS00871; CLPAB_2; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU004432};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW ProRule:PRU01251}.
FT DOMAIN 78..222
FT /note="Clp R"
FT /evidence="ECO:0000259|PROSITE:PS51903"
FT COILED 488..602
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 973 AA; 109153 MW; 27F909DA9FF997E2 CRC64;
MATAKTTATA AFSSIVGGVG SDSRKVSSFS HLQPSVAFPA KPSSFKALKL KQSARLTRRL
QHQPFVVRCE ASSNGRLTQQ EFTEMAWQSI VSSPDVAKEN KQQIVETEHL MKALLEQKNG
LARRIFSKIG VDNTKVLEAT DKFIQRQPKV YGEAAGSMLG RDLEGLFQRA RQYKKDLGDS
YVSVEHLVLA FVDDKRFGKQ LFRDFQISEK SLKTAIESIR GKQSVIDQDP EGKYEALEKY
GKDLTAMARE GKLDPVIGRD DEIRRCIQIL SRRTKNNPVL IGEPGVGKTA ISEGLAQRIV
QGDVPQALMN RKLISLDMGA LIAGAKYRGE FEDRLKAVLK EVTDSEGQTI LFIDEIHTVV
GAGATNGAMD AGNLLKPMLG RGELRCIGAT TLDEYRKYIE KDPALERRFQ QVYVDQPTVE
DTVSILRGLR ERYELHHGVR ISDSALVEAA ILSDRYISGR FLPDKAIDLV DEAAAKLKME
ITSKPTALDE LDRAVIKLEM ERLSLTNDTD KASRERLNRI ETELVLLKEK QAELTEQWEH
ERSVMSRLQS IKEEIDRVSL EIQQAEREYD LNRAAELKYG SLNSLQRQLN EAEKELNEYL
SSGKSMFREE VLGSDIAEIV SKWTGIPVSK LQQSDRDKLL HLEEELHRRV IGQNPAVTAV
AEAIQRSRAG LSDPGRPIAS FMFMGPTGVG KTELAKALAS YLFNTEEALV RIDMSEYMEK
HAVSRLIGAP PGYVGYEEGG QLTEVVRRRP YSVILFDEIE KAHGDVFNVF LQILDDGRVT
DSQGRTVSFT NTVIIMTSNV GSQYILNSNA DDEGSELGYE TIKQRVMDAA RSIFRPEFMN
RVDEYIVFQP LDREQINSIV RLQLARVQKR IADRKMKIEI TDAAVDLLGS LGYDPNYGAR
PVKRVIQQNI ENELAKGILR GDFKEEDGIL IDTEVTAFSN GQLPQQKLTF KKITSETADA
EKEEEEAFSK QSN
//