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Database: UniProt
Entry: A0A078GP33_BRANA
LinkDB: A0A078GP33_BRANA
Original site: A0A078GP33_BRANA 
ID   A0A078GP33_BRANA        Unreviewed;       973 AA.
AC   A0A078GP33;
DT   29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT   29-OCT-2014, sequence version 1.
DT   24-JAN-2024, entry version 42.
DE   SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF1783484.1};
DE   SubName: Full=BnaC09g42450D protein {ECO:0000313|EMBL:CDY26423.1};
GN   Name=BnaC09g42450D {ECO:0000313|EMBL:CDY26423.1};
GN   ORFNames=DARMORV10_C09P61700.1 {ECO:0000313|EMBL:CAF1783484.1},
GN   GSBRNA2T00035213001 {ECO:0000313|EMBL:CDY26423.1};
OS   Brassica napus (Rape).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX   NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY26423.1, ECO:0000313|Proteomes:UP000028999};
RN   [1] {ECO:0000313|EMBL:CDY26423.1, ECO:0000313|Proteomes:UP000028999}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX   PubMed=25146293; DOI=10.1126/science.1253435;
RA   Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA   Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA   Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA   Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA   Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA   Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA   Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA   Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA   Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA   Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA   Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA   Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA   Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT   "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT   Brassica napus oilseed genome.";
RL   Science 345:950-953(2014).
RN   [2] {ECO:0000313|EMBL:CDY26423.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Genoscope - CEA;
RL   Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:CAF1783484.1}
RP   NUCLEOTIDE SEQUENCE.
RG   Genoscope - CEA;
RA   William W.;
RL   Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC       {ECO:0000256|ARBA:ARBA00008675, ECO:0000256|RuleBase:RU004432}.
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DR   EMBL; HG994373; CAF1783484.1; -; Genomic_DNA.
DR   EMBL; LK032190; CDY26423.1; -; Genomic_DNA.
DR   RefSeq; XP_013720900.1; XM_013865446.1.
DR   RefSeq; XP_013720908.1; XM_013865454.1.
DR   STRING; 3708.A0A078GP33; -.
DR   PaxDb; 3708-A0A078GP33; -.
DR   EnsemblPlants; CDY26423; CDY26423; GSBRNA2T00035213001.
DR   GeneID; 106424692; -.
DR   Gramene; CDY26423; CDY26423; GSBRNA2T00035213001.
DR   KEGG; bna:106424692; -.
DR   OrthoDB; 35211at2759; -.
DR   Proteomes; UP000028999; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IBA:GO_Central.
DR   GO; GO:0034605; P:cellular response to heat; IBA:GO_Central.
DR   GO; GO:0042026; P:protein refolding; IEA:InterPro.
DR   CDD; cd00009; AAA; 1.
DR   CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR   Gene3D; 1.10.8.60; -; 1.
DR   Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR003959; ATPase_AAA_core.
DR   InterPro; IPR017730; Chaperonin_ClpB.
DR   InterPro; IPR019489; Clp_ATPase_C.
DR   InterPro; IPR036628; Clp_N_dom_sf.
DR   InterPro; IPR004176; Clp_R_dom.
DR   InterPro; IPR001270; ClpA/B.
DR   InterPro; IPR018368; ClpA/B_CS1.
DR   InterPro; IPR028299; ClpA/B_CS2.
DR   InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   NCBIfam; TIGR03346; chaperone_ClpB; 1.
DR   PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR   PANTHER; PTHR11638:SF186; BNAC09G42450D PROTEIN; 1.
DR   Pfam; PF00004; AAA; 1.
DR   Pfam; PF07724; AAA_2; 1.
DR   Pfam; PF17871; AAA_lid_9; 1.
DR   Pfam; PF02861; Clp_N; 2.
DR   Pfam; PF10431; ClpB_D2-small; 1.
DR   PRINTS; PR00300; CLPPROTEASEA.
DR   SMART; SM00382; AAA; 2.
DR   SMART; SM01086; ClpB_D2-small; 1.
DR   SUPFAM; SSF81923; Double Clp-N motif; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR   PROSITE; PS51903; CLP_R; 1.
DR   PROSITE; PS00870; CLPAB_1; 1.
DR   PROSITE; PS00871; CLPAB_2; 1.
PE   3: Inferred from homology;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW   Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW   ECO:0000256|RuleBase:RU004432};
KW   Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW   ProRule:PRU01251}.
FT   DOMAIN          78..222
FT                   /note="Clp R"
FT                   /evidence="ECO:0000259|PROSITE:PS51903"
FT   COILED          488..602
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   973 AA;  109153 MW;  27F909DA9FF997E2 CRC64;
     MATAKTTATA AFSSIVGGVG SDSRKVSSFS HLQPSVAFPA KPSSFKALKL KQSARLTRRL
     QHQPFVVRCE ASSNGRLTQQ EFTEMAWQSI VSSPDVAKEN KQQIVETEHL MKALLEQKNG
     LARRIFSKIG VDNTKVLEAT DKFIQRQPKV YGEAAGSMLG RDLEGLFQRA RQYKKDLGDS
     YVSVEHLVLA FVDDKRFGKQ LFRDFQISEK SLKTAIESIR GKQSVIDQDP EGKYEALEKY
     GKDLTAMARE GKLDPVIGRD DEIRRCIQIL SRRTKNNPVL IGEPGVGKTA ISEGLAQRIV
     QGDVPQALMN RKLISLDMGA LIAGAKYRGE FEDRLKAVLK EVTDSEGQTI LFIDEIHTVV
     GAGATNGAMD AGNLLKPMLG RGELRCIGAT TLDEYRKYIE KDPALERRFQ QVYVDQPTVE
     DTVSILRGLR ERYELHHGVR ISDSALVEAA ILSDRYISGR FLPDKAIDLV DEAAAKLKME
     ITSKPTALDE LDRAVIKLEM ERLSLTNDTD KASRERLNRI ETELVLLKEK QAELTEQWEH
     ERSVMSRLQS IKEEIDRVSL EIQQAEREYD LNRAAELKYG SLNSLQRQLN EAEKELNEYL
     SSGKSMFREE VLGSDIAEIV SKWTGIPVSK LQQSDRDKLL HLEEELHRRV IGQNPAVTAV
     AEAIQRSRAG LSDPGRPIAS FMFMGPTGVG KTELAKALAS YLFNTEEALV RIDMSEYMEK
     HAVSRLIGAP PGYVGYEEGG QLTEVVRRRP YSVILFDEIE KAHGDVFNVF LQILDDGRVT
     DSQGRTVSFT NTVIIMTSNV GSQYILNSNA DDEGSELGYE TIKQRVMDAA RSIFRPEFMN
     RVDEYIVFQP LDREQINSIV RLQLARVQKR IADRKMKIEI TDAAVDLLGS LGYDPNYGAR
     PVKRVIQQNI ENELAKGILR GDFKEEDGIL IDTEVTAFSN GQLPQQKLTF KKITSETADA
     EKEEEEAFSK QSN
//
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