ID A0A078GS05_BRANA Unreviewed; 689 AA.
AC A0A078GS05;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 24-JAN-2024, entry version 39.
DE SubName: Full=BnaCnng05170D protein {ECO:0000313|EMBL:CDY27932.1};
GN Name=BnaCnng05170D {ECO:0000313|EMBL:CDY27932.1};
GN ORFNames=GSBRNA2T00038832001 {ECO:0000313|EMBL:CDY27932.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY27932.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY27932.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
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DR EMBL; LK032212; CDY27932.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A078GS05; -.
DR SMR; A0A078GS05; -.
DR STRING; 3708.A0A078GS05; -.
DR PaxDb; 3708-A0A078GS05; -.
DR EnsemblPlants; CDY27932; CDY27932; GSBRNA2T00038832001.
DR Gramene; CDY27932; CDY27932; GSBRNA2T00038832001.
DR OMA; DRRCHTS; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 1.
DR InterPro; IPR000571; Znf_CCCH.
DR InterPro; IPR036855; Znf_CCCH_sf.
DR PANTHER; PTHR36886; PROTEIN FRIGIDA-ESSENTIAL 1; 1.
DR PANTHER; PTHR36886:SF3; PROTEIN FRIGIDA-ESSENTIAL 1; 1.
DR Pfam; PF18345; zf_CCCH_4; 1.
DR SMART; SM00356; ZnF_C3H1; 1.
DR SUPFAM; SSF90229; CCCH zinc finger; 1.
DR PROSITE; PS50103; ZF_C3H1; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 147..174
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 147..174
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 1..44
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 342..378
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 390..437
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 465..484
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 490..520
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 350..364
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 465..480
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 502..520
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 689 AA; 75440 MW; 3808E20F41672F0C CRC64;
MSDSDMDIDD DEVQVQVQPT AAGESRLLAR PIEASNSQND VKKHSDEQLK IINGNLQPNL
SGNSGKNPIL EGEKGTILPS LRFPAPGQSF PLVNGPEQSK IINGYLQPNL SGSSGKKLML
EGEKDTVLSR FPAPMQTLPP ANGPEQKRPA YPCKFFAQGR CTKGNSCRFL HVNENMNRTS
QQQVVNNMAG TSGIQSIEER RPLESKEGVR FSMLSTNGVT SLVNPPAGQR VFPFTNEMRF
MPSLENMGRG SLQKCGAVFT ENRPVFGNST SSFPLRSSFV QEHGSFITSN RQTDMGSSGP
AWTGSVFSSA PLNQYASPFG NFENRNDINE SGSLPMEQAL SVPSVQDAEV DTTSDKKEVS
SNDWEPSEPF RPSFTIPPYI LPSSDALYDP FMDIENPEGR SPKAQSSTKG KDAQKKSGQQ
KDGDSASNDK NSSCSQNQFQ ETVVRKKLET HGLVEGVATS VVDQNDASAT TPSKEISSSA
AVENRAVLKR SKPAGHGSWH RSDGSSHQKK LKTDEMDGEV RSDAGTKVMR QFRTAVVETI
KDMLKPLWRE GRLSKDVHNM IVKRATEKIV SAAVQLHQVP TNNESVEKYL SMSSTRIVKL
VEGYVEKFGK PQSKPSGLAP IFLHLHSYPF TNNGRRLELE LCRGILCLFG IASEAGEGGN
RKKRNSVEGT LSNILTMFLC LRTIQIVSD
//
