ID A0A078GVX2_BRANA Unreviewed; 463 AA.
AC A0A078GVX2;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF2046392.1};
DE SubName: Full=BnaAnng03950D protein {ECO:0000313|EMBL:CDY30620.1};
GN Name=BnaAnng03950D {ECO:0000313|EMBL:CDY30620.1};
GN ORFNames=DARMORV10_A09P43030.1 {ECO:0000313|EMBL:CAF2046392.1},
GN GSBRNA2T00045907001 {ECO:0000313|EMBL:CDY30620.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY30620.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY30620.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY30620.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF2046392.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 43 family.
CC {ECO:0000256|ARBA:ARBA00009865, ECO:0000256|RuleBase:RU361187}.
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DR EMBL; HG994363; CAF2046392.1; -; Genomic_DNA.
DR EMBL; LK032256; CDY30620.1; -; Genomic_DNA.
DR RefSeq; XP_013686879.1; XM_013831425.1.
DR RefSeq; XP_013686880.1; XM_013831426.1.
DR STRING; 3708.A0A078GVX2; -.
DR PaxDb; 3708-A0A078GVX2; -.
DR EnsemblPlants; CDY30620; CDY30620; GSBRNA2T00045907001.
DR GeneID; 106390884; -.
DR Gramene; CDY30620; CDY30620; GSBRNA2T00045907001.
DR KEGG; bna:106390884; -.
DR OMA; NDTSHYY; -.
DR OrthoDB; 585506at2759; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0004553; F:hydrolase activity, hydrolyzing O-glycosyl compounds; IEA:InterPro.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR CDD; cd18825; GH43_CtGH43-like; 1.
DR InterPro; IPR006710; Glyco_hydro_43.
DR InterPro; IPR023296; Glyco_hydro_beta-prop_sf.
DR PANTHER; PTHR22925; GLYCOSYL HYDROLASE 43 FAMILY MEMBER; 1.
DR PANTHER; PTHR22925:SF59; GLYCOSYL HYDROLASE FAMILY PROTEIN 43; 1.
DR Pfam; PF04616; Glyco_hydro_43; 1.
DR SUPFAM; SSF75005; Arabinanase/levansucrase/invertase; 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 3: Inferred from homology;
KW Glycosidase {ECO:0000256|RuleBase:RU361187};
KW Hydrolase {ECO:0000256|RuleBase:RU361187};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..37
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
SQ SEQUENCE 463 AA; 52681 MW; BA18FD3050FD9E87 CRC64;
MAKSKHNKKP ALLRCSPFSL VSTLAGCVFM IHLIMLYSRN YSVDLEVSSR LLTHHPIVRE
LERVEEENIH MPPPRKRSAR AIKRKPKRPT TLVEEFLDEN SQIRHLFFPD IKTAFGPTKD
GNDTLHNFFP GKIWLDTEGN PIQAHGGGIL YDERSKSYYW YGEYKDGPTY LSYKNGPARV
DIIGVGCYSS QDLWTWKNEG VVLAAEETDE THDLHKSNVL ERPKVIYNSE TGKYVMWMHI
DDANYTKASV GVAISDTPTG PFDYLYSKSP HGFDSRDMTI FKDDDNVAYL IYSSEDNSVL
HIGPLTEDYL DVKPVMKRIM VGQHREAPAI FKHQNTYYMI TSGCTGWAPN EALAHAAESI
MGPWETLGNP CVGGNKVFRL TTFFSQSTYV IPLPGVPGAF IFMADRWNPA DLRDSRYLWL
PLIVGGPADR PLEFTFGFPM WSRVSVYWHR QWRLPLGGGK NIA
//
