ID A0A078GYJ9_BRANA Unreviewed; 746 AA.
AC A0A078GYJ9;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF2282344.1};
DE SubName: Full=BnaA04g15870D protein {ECO:0000313|EMBL:CDY30546.1};
GN Name=BnaA04g15870D {ECO:0000313|EMBL:CDY30546.1};
GN ORFNames=DARMORV10_A04P20970.1 {ECO:0000313|EMBL:CAF2282344.1},
GN GSBRNA2T00045276001 {ECO:0000313|EMBL:CDY30546.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY30546.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY30546.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY30546.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF2282344.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the SEC23/SEC24 family. SEC24 subfamily.
CC {ECO:0000256|ARBA:ARBA00008334}.
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DR EMBL; HG994358; CAF2282344.1; -; Genomic_DNA.
DR EMBL; LK032254; CDY30546.1; -; Genomic_DNA.
DR STRING; 3708.A0A078GYJ9; -.
DR PaxDb; 3708-A0A078GYJ9; -.
DR EnsemblPlants; CDY30546; CDY30546; GSBRNA2T00045276001.
DR Gramene; CDY30546; CDY30546; GSBRNA2T00045276001.
DR OMA; LPVPCIK; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0030127; C:COPII vesicle coat; IBA:GO_Central.
DR GO; GO:0070971; C:endoplasmic reticulum exit site; IBA:GO_Central.
DR GO; GO:0000149; F:SNARE binding; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IBA:GO_Central.
DR GO; GO:0090110; P:COPII-coated vesicle cargo loading; IBA:GO_Central.
DR GO; GO:0006886; P:intracellular protein transport; IEA:InterPro.
DR Gene3D; 1.20.120.730; Sec23/Sec24 helical domain; 1.
DR Gene3D; 3.40.50.410; von Willebrand factor, type A domain; 1.
DR Gene3D; 2.30.30.380; Zn-finger domain of Sec23/24; 1.
DR InterPro; IPR006900; Sec23/24_helical_dom.
DR InterPro; IPR036175; Sec23/24_helical_dom_sf.
DR InterPro; IPR006896; Sec23/24_trunk_dom.
DR InterPro; IPR036465; vWFA_dom_sf.
DR InterPro; IPR006895; Znf_Sec23_Sec24.
DR InterPro; IPR036174; Znf_Sec23_Sec24_sf.
DR PANTHER; PTHR13803:SF17; OS05G0443300 PROTEIN; 1.
DR PANTHER; PTHR13803; SEC24-RELATED PROTEIN; 1.
DR Pfam; PF04815; Sec23_helical; 1.
DR Pfam; PF04811; Sec23_trunk; 1.
DR Pfam; PF04810; zf-Sec23_Sec24; 1.
DR SUPFAM; SSF81995; beta-sandwich domain of Sec23/24; 1.
DR SUPFAM; SSF81811; Helical domain of Sec23/24; 1.
DR SUPFAM; SSF53300; vWA-like; 1.
DR SUPFAM; SSF82919; Zn-finger domain of Sec23/24; 1.
PE 3: Inferred from homology;
KW Protein transport {ECO:0000256|ARBA:ARBA00022927};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Transport {ECO:0000256|ARBA:ARBA00022448}.
FT DOMAIN 51..83
FT /note="Zinc finger Sec23/Sec24-type"
FT /evidence="ECO:0000259|Pfam:PF04810"
FT DOMAIN 122..374
FT /note="Sec23/Sec24 trunk"
FT /evidence="ECO:0000259|Pfam:PF04811"
FT DOMAIN 500..612
FT /note="Sec23/Sec24 helical"
FT /evidence="ECO:0000259|Pfam:PF04815"
SQ SEQUENCE 746 AA; 82861 MW; D7CEB4D9F21FC2AA CRC64;
MAVRATASRF PIDSDALEAS GLPWGLTVTP FAAKDESGIG PAYGSNGHLL PRCENCYAYF
NTYCELDQWA WTCSLCGTLN GLSSDAIARY SYPHDSIPET SSSFVDLELP LDGSEEEMTQ
ARPVYVAAID LSSSEEFLEL TKSALLAALE ALSPGSLFGL ATFSHKIGLY DVQGPIPVVK
NVFIPPDAES KLPLELEDAM PLLQFLAPVE TCKDRIAAAL ETLRPITSWE RSSGAAQGID
GVLMGGRGFG TAMEALFNYL GSEFGNTFAL ARVFAFMSGP PDYGRGQLDT SRYGEQYASK
RVDADRALLP EQTPFYKDLA TIAVQSGVCV DVFAVTNEYT DLASLKFLSI ESGGSLFLYS
STDDSTLPQD MFRMLNRPYA FNCVLRLRTS TEFKPLHSYG HFFPDPQYEN LQHIICCDSY
ATYAYDFEFA NNTGFSRHSR EPPVVQIAFQ YTVVVPTEGL QNSELPSSSR GKHVLQRRLR
IRTMQFETAQ NINEIYDSVD HEVVLSLLVH KVILVSLEDG VREGRALLHD WLVILTAQYN
DAYNLVQYKN GNKSMSSQID ITFSQCPQLE PLPRLVFALL RNPLLRFHEE GVHPDYRIYL
QCLFSVLEPS SLHCGIYPSL TSYSTPDKQA YPRHSLSRAA LLTSDSPIFF LDAYTTLIVF
YTSTADPSLP FPPPQDCLLR KNINMVKQGR SITPKLMFIR GGKDDATAFE NYLIEEQDVD
GSGFASAKGF VSFLDDISQS VAEYMK
//
