ID A0A078H2X1_BRANA Unreviewed; 380 AA.
AC A0A078H2X1;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE SubName: Full=BnaCnng06450D protein {ECO:0000313|EMBL:CDY32136.1};
GN Name=BnaCnng06450D {ECO:0000313|EMBL:CDY32136.1};
GN ORFNames=GSBRNA2T00051503001 {ECO:0000313|EMBL:CDY32136.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY32136.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY32136.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
CC -!- SIMILARITY: Belongs to the VAMP-associated protein (VAP) (TC 9.B.17)
CC family. {ECO:0000256|ARBA:ARBA00008932}.
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DR EMBL; LK032288; CDY32136.1; -; Genomic_DNA.
DR RefSeq; XP_013750895.1; XM_013895441.1.
DR RefSeq; XP_013750896.1; XM_013895442.1.
DR RefSeq; XP_013750897.1; XM_013895443.1.
DR AlphaFoldDB; A0A078H2X1; -.
DR STRING; 3708.A0A078H2X1; -.
DR PaxDb; 3708-A0A078H2X1; -.
DR EnsemblPlants; CDY32136; CDY32136; GSBRNA2T00051503001.
DR GeneID; 106453185; -.
DR Gramene; CDY32136; CDY32136; GSBRNA2T00051503001.
DR KEGG; bna:106453185; -.
DR OMA; PEEPKMH; -.
DR OrthoDB; 122649at2759; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0005789; C:endoplasmic reticulum membrane; IBA:GO_Central.
DR GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR GO; GO:0090158; P:endoplasmic reticulum membrane organization; IBA:GO_Central.
DR GO; GO:0061817; P:endoplasmic reticulum-plasma membrane tethering; IBA:GO_Central.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR000535; MSP_dom.
DR InterPro; IPR008962; PapD-like_sf.
DR InterPro; IPR016763; VAP.
DR PANTHER; PTHR10809; VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN; 1.
DR PANTHER; PTHR10809:SF45; VESICLE-ASSOCIATED PROTEIN 2-2; 1.
DR Pfam; PF00635; Motile_Sperm; 1.
DR SUPFAM; SSF49354; PapD-like; 1.
DR PROSITE; PS50202; MSP; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils}; Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 357..378
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 5..125
FT /note="MSP"
FT /evidence="ECO:0000259|PROSITE:PS50202"
FT COILED 301..328
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 380 AA; 42607 MW; 1E17F8BB7DCD7F30 CRC64;
MNMPLLDIQP RTLKFVVDLK KQSTCVVQLT NTTHLFVAFK VKTTSPKKYC VRPNVGVVAP
KSTCEFSVIM QAFKEPPPDM ACKDKFLIQS TAVPEETTDE DITASMFSKA EGKHIEENKL
RVTLVMASDS PELSPIKGTL KQEAVFEDSI PKDRLHGQSE TLPPQYESEI VKEPPRMVGH
DELKQPRKGV IDFIENDIKA TKGGGYDSSK MAKEADSDLI RSHKDEDDGR GIKPTHDLGT
TTNMAMDLSG DQGFANGKTS ANSVTYPEEP KMHRDRDVVQ QKKTDAQNIK ALDEYKLVKD
IEEMKLKVNA LESKLKQADS TFSKLMEERS ISSQHRESLQ QELAEMRTKK IVKEVHIGFP
LLFVCVVAFI SIVIGYCLRT
//
