ID A0A078H7X0_BRANA Unreviewed; 128 AA.
AC A0A078H7X0;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF1702477.1};
DE SubName: Full=BnaA09g20820D protein {ECO:0000313|EMBL:CDY16704.1};
DE SubName: Full=BnaC02g26240D protein {ECO:0000313|EMBL:CDY33532.1};
DE SubName: Full=BnaC03g29670D protein {ECO:0000313|EMBL:CDY21283.1};
GN Name=BnaC02g26240D {ECO:0000313|EMBL:CDY33532.1};
GN Synonyms=BnaA09g20820D {ECO:0000313|EMBL:CDY16704.1}, BnaC03g29670D
GN {ECO:0000313|EMBL:CDY21283.1};
GN ORFNames=DARMORV10_A01P13740.1 {ECO:0000313|EMBL:CAF2149175.1},
GN DARMORV10_A03P29820.1 {ECO:0000313|EMBL:CAF2125315.1},
GN DARMORV10_C02P40530.1 {ECO:0000313|EMBL:CAF1916942.1},
GN DARMORV10_C03P36080.1 {ECO:0000313|EMBL:CAF1702477.1},
GN GSBRNA2T00015612001 {ECO:0000313|EMBL:CDY21283.1}, GSBRNA2T00054786001
GN {ECO:0000313|EMBL:CDY33532.1}, GSBRNA2T00094563001
GN {ECO:0000313|EMBL:CDY16704.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY33532.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY33532.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY33532.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF1702477.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Common component of the spliceosome and rRNA processing
CC machinery. {ECO:0000256|RuleBase:RU366039}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000256|ARBA:ARBA00004604, ECO:0000256|RuleBase:RU366039}.
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL8 family.
CC {ECO:0000256|ARBA:ARBA00007337, ECO:0000256|RuleBase:RU366039}.
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DR EMBL; HG994367; CAF1702477.1; -; Genomic_DNA.
DR EMBL; HG994366; CAF1916942.1; -; Genomic_DNA.
DR EMBL; HG994357; CAF2125315.1; -; Genomic_DNA.
DR EMBL; HG994355; CAF2149175.1; -; Genomic_DNA.
DR EMBL; LK032066; CDY16704.1; -; Genomic_DNA.
DR EMBL; LK032119; CDY21283.1; -; Genomic_DNA.
DR EMBL; LK032316; CDY33532.1; -; Genomic_DNA.
DR RefSeq; XP_013649200.1; XM_013793746.1.
DR RefSeq; XP_013661126.1; XM_013805672.1.
DR RefSeq; XP_013672072.1; XM_013816618.1.
DR RefSeq; XP_013676952.1; XM_013821498.1.
DR RefSeq; XP_013676965.1; XM_013821511.1.
DR RefSeq; XP_013732686.1; XM_013877232.1.
DR RefSeq; XP_013732687.1; XM_013877233.1.
DR RefSeq; XP_013733993.1; XM_013878539.1.
DR RefSeq; XP_013735497.1; XM_013880043.1.
DR STRING; 3708.A0A078H7X0; -.
DR PaxDb; 3708-A0A078H7X0; -.
DR EnsemblPlants; CDX79152; CDX79152; GSBRNA2T00131708001.
DR EnsemblPlants; CDX82937; CDX82937; GSBRNA2T00138331001.
DR EnsemblPlants; CDX90844; CDX90844; GSBRNA2T00151559001.
DR EnsemblPlants; CDX94527; CDX94527; GSBRNA2T00157769001.
DR EnsemblPlants; CDY16704; CDY16704; GSBRNA2T00094563001.
DR EnsemblPlants; CDY21283; CDY21283; GSBRNA2T00015612001.
DR EnsemblPlants; CDY33532; CDY33532; GSBRNA2T00054786001.
DR GeneID; 106353919; -.
DR GeneID; 106366115; -.
DR GeneID; 106376528; -.
DR GeneID; 106381583; -.
DR GeneID; 106381595; -.
DR GeneID; 106436275; -.
DR GeneID; 106437622; -.
DR GeneID; 106438771; -.
DR Gramene; CDX79152; CDX79152; GSBRNA2T00131708001.
DR Gramene; CDX82937; CDX82937; GSBRNA2T00138331001.
DR Gramene; CDX90844; CDX90844; GSBRNA2T00151559001.
DR Gramene; CDX94527; CDX94527; GSBRNA2T00157769001.
DR Gramene; CDY16704; CDY16704; GSBRNA2T00094563001.
DR Gramene; CDY21283; CDY21283; GSBRNA2T00015612001.
DR Gramene; CDY33532; CDY33532; GSBRNA2T00054786001.
DR KEGG; bna:106353919; -.
DR KEGG; bna:106366115; -.
DR KEGG; bna:106376528; -.
DR KEGG; bna:106381583; -.
DR KEGG; bna:106381595; -.
DR KEGG; bna:106436275; -.
DR KEGG; bna:106437622; -.
DR KEGG; bna:106438771; -.
DR OMA; IKNQIYA; -.
DR OrthoDB; 5481533at2759; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0031428; C:box C/D RNP complex; IBA:GO_Central.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0071011; C:precatalytic spliceosome; IBA:GO_Central.
DR GO; GO:0032040; C:small-subunit processome; IBA:GO_Central.
DR GO; GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0000470; P:maturation of LSU-rRNA; IBA:GO_Central.
DR GO; GO:0030490; P:maturation of SSU-rRNA; IBA:GO_Central.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IBA:GO_Central.
DR CDD; cd21104; SNU13; 1.
DR Gene3D; 3.30.1330.30; -; 1.
DR InterPro; IPR002415; H/ACA_rnp_Nhp2-like.
DR InterPro; IPR029064; Ribosomal_eL30-like_sf.
DR InterPro; IPR004037; Ribosomal_eL8-like_CS.
DR InterPro; IPR004038; Ribosomal_eL8/eL30/eS12/Gad45.
DR InterPro; IPR018492; Ribosomal_eL8/Nhp2.
DR PANTHER; PTHR23105:SF216; RIBONUCLOPROTEIN; 1.
DR PANTHER; PTHR23105; RIBOSOMAL PROTEIN L7AE FAMILY MEMBER; 1.
DR Pfam; PF01248; Ribosomal_L7Ae; 1.
DR PRINTS; PR00881; L7ARS6FAMILY.
DR PRINTS; PR00883; NUCLEARHMG.
DR SUPFAM; SSF55315; L30e-like; 1.
DR PROSITE; PS01082; RIBOSOMAL_L7AE; 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|RuleBase:RU366039};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274,
KW ECO:0000256|RuleBase:RU366039};
KW RNA-binding {ECO:0000256|RuleBase:RU366039}.
FT DOMAIN 23..111
FT /note="Ribosomal protein eL8/eL30/eS12/Gadd45"
FT /evidence="ECO:0000259|Pfam:PF01248"
SQ SEQUENCE 128 AA; 13886 MW; 9BA185BAAED2A3B8 CRC64;
MTVEAVNPKA YPLADSQLAI TILDLVQQAT NYKQLKKGAN EATKTLNRGI SEFVVMAADA
EPLEILLHLP LLAEDKNVPY VFVPSKQALG RACGVTRPVI ACSVTSNEAS QLKSQIQQLK
DAIEKLLI
//
